Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 JMJD6-208ENST00000617192 5517 ntTSL 5 BASIC18.45■□□□□ 0.54
UPF2Q9HAU5 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
UPF2Q9HAU5 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC18.44■□□□□ 0.54
UPF2Q9HAU5 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
UPF2Q9HAU5 SLC9A8-201ENST00000361573 6094 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
UPF2Q9HAU5 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
UPF2Q9HAU5 SYT1-204ENST00000457153 4592 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
UPF2Q9HAU5 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
UPF2Q9HAU5 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
UPF2Q9HAU5 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
UPF2Q9HAU5 NOL9-201ENST00000377705 6649 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
UPF2Q9HAU5 C11orf87-201ENST00000327419 5884 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
UPF2Q9HAU5 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
UPF2Q9HAU5 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
UPF2Q9HAU5 SPAST-201ENST00000315285 5117 ntAPPRIS P4 TSL 1 (best) BASIC18.44■□□□□ 0.54
UPF2Q9HAU5 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC18.44■□□□□ 0.54
UPF2Q9HAU5 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC18.44■□□□□ 0.54
UPF2Q9HAU5 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
UPF2Q9HAU5 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
UPF2Q9HAU5 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC18.44■□□□□ 0.54
UPF2Q9HAU5 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC18.44■□□□□ 0.54
UPF2Q9HAU5 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
UPF2Q9HAU5 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
UPF2Q9HAU5 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
UPF2Q9HAU5 SPDYE7P-202ENST00000420373 878 ntBASIC18.44■□□□□ 0.54
UPF2Q9HAU5 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC18.44■□□□□ 0.54
UPF2Q9HAU5 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC18.44■□□□□ 0.54
UPF2Q9HAU5 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC18.44■□□□□ 0.54
UPF2Q9HAU5 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC18.44■□□□□ 0.54
UPF2Q9HAU5 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC18.44■□□□□ 0.54
UPF2Q9HAU5 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC18.44■□□□□ 0.54
UPF2Q9HAU5 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC18.44■□□□□ 0.54
UPF2Q9HAU5 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
UPF2Q9HAU5 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
UPF2Q9HAU5 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
UPF2Q9HAU5 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
UPF2Q9HAU5 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
UPF2Q9HAU5 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
UPF2Q9HAU5 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
UPF2Q9HAU5 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
UPF2Q9HAU5 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
UPF2Q9HAU5 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
UPF2Q9HAU5 GRAMD4P3-201ENST00000621665 1669 ntBASIC18.44■□□□□ 0.54
UPF2Q9HAU5 ATN1-201ENST00000356654 4351 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
UPF2Q9HAU5 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
UPF2Q9HAU5 STX16-207ENST00000371141 4937 ntAPPRIS P3 TSL 2 BASIC18.44■□□□□ 0.54
UPF2Q9HAU5 AC089987.1-201ENST00000551654 2209 ntBASIC18.43■□□□□ 0.54
UPF2Q9HAU5 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
UPF2Q9HAU5 AC092053.3-201ENST00000641308 4975 ntBASIC18.43■□□□□ 0.54
UPF2Q9HAU5 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC18.43■□□□□ 0.54
UPF2Q9HAU5 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
UPF2Q9HAU5 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
UPF2Q9HAU5 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
UPF2Q9HAU5 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
UPF2Q9HAU5 NOX5-201ENST00000260364 8592 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
UPF2Q9HAU5 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC18.43■□□□□ 0.54
UPF2Q9HAU5 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC18.43■□□□□ 0.54
UPF2Q9HAU5 RPS6KC1-206ENST00000543354 4082 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
UPF2Q9HAU5 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
UPF2Q9HAU5 CX3CL1-204ENST00000565912 5796 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
UPF2Q9HAU5 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
UPF2Q9HAU5 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
UPF2Q9HAU5 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
UPF2Q9HAU5 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC18.43■□□□□ 0.54
UPF2Q9HAU5 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
UPF2Q9HAU5 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
UPF2Q9HAU5 TEX30-205ENST00000376029 959 ntTSL 2 BASIC18.43■□□□□ 0.54
UPF2Q9HAU5 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC18.43■□□□□ 0.54
UPF2Q9HAU5 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC18.43■□□□□ 0.54
UPF2Q9HAU5 GPS2P2-201ENST00000430745 888 ntBASIC18.43■□□□□ 0.54
UPF2Q9HAU5 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC18.43■□□□□ 0.54
UPF2Q9HAU5 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC18.43■□□□□ 0.54
UPF2Q9HAU5 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC18.43■□□□□ 0.54
UPF2Q9HAU5 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC18.43■□□□□ 0.54
UPF2Q9HAU5 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
UPF2Q9HAU5 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC18.43■□□□□ 0.54
UPF2Q9HAU5 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC18.43■□□□□ 0.54
UPF2Q9HAU5 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC18.43■□□□□ 0.54
UPF2Q9HAU5 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC18.43■□□□□ 0.54
UPF2Q9HAU5 RAB18-208ENST00000611151 4931 ntTSL 5 BASIC18.43■□□□□ 0.54
UPF2Q9HAU5 ADCYAP1R1-207ENST00000614107 6575 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
UPF2Q9HAU5 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
UPF2Q9HAU5 JMJD6-203ENST00000445478 5303 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
UPF2Q9HAU5 WASHC2C-210ENST00000623400 4616 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
UPF2Q9HAU5 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
UPF2Q9HAU5 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
UPF2Q9HAU5 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
UPF2Q9HAU5 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
UPF2Q9HAU5 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
UPF2Q9HAU5 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
UPF2Q9HAU5 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC18.43■□□□□ 0.54
UPF2Q9HAU5 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
UPF2Q9HAU5 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC18.43■□□□□ 0.54
UPF2Q9HAU5 PAG1-201ENST00000220597 10744 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
UPF2Q9HAU5 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
UPF2Q9HAU5 BTRC-203ENST00000393441 6084 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
UPF2Q9HAU5 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
UPF2Q9HAU5 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC18.42■□□□□ 0.54
UPF2Q9HAU5 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC18.42■□□□□ 0.54
UPF2Q9HAU5 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 56.3 ms