Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC14.06□□□□□ -0.16
AMBRA1Q9C0C7 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC14.06□□□□□ -0.16
AMBRA1Q9C0C7 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
AMBRA1Q9C0C7 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
AMBRA1Q9C0C7 ST20-AS1-201ENST00000560255 4223 ntBASIC14.06□□□□□ -0.16
AMBRA1Q9C0C7 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC14.06□□□□□ -0.16
AMBRA1Q9C0C7 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
AMBRA1Q9C0C7 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
AMBRA1Q9C0C7 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
AMBRA1Q9C0C7 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
AMBRA1Q9C0C7 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
AMBRA1Q9C0C7 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
AMBRA1Q9C0C7 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC14.06□□□□□ -0.16
AMBRA1Q9C0C7 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
AMBRA1Q9C0C7 GOLGA8VP-201ENST00000559009 1798 ntBASIC14.06□□□□□ -0.16
AMBRA1Q9C0C7 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
AMBRA1Q9C0C7 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
AMBRA1Q9C0C7 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
AMBRA1Q9C0C7 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
AMBRA1Q9C0C7 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
AMBRA1Q9C0C7 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
AMBRA1Q9C0C7 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC14.05□□□□□ -0.16
AMBRA1Q9C0C7 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
AMBRA1Q9C0C7 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
AMBRA1Q9C0C7 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
AMBRA1Q9C0C7 AC022144.1-201ENST00000602255 1580 ntBASIC14.05□□□□□ -0.16
AMBRA1Q9C0C7 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
AMBRA1Q9C0C7 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
AMBRA1Q9C0C7 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
AMBRA1Q9C0C7 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
AMBRA1Q9C0C7 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
AMBRA1Q9C0C7 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
AMBRA1Q9C0C7 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
AMBRA1Q9C0C7 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
AMBRA1Q9C0C7 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
AMBRA1Q9C0C7 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
AMBRA1Q9C0C7 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
AMBRA1Q9C0C7 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
AMBRA1Q9C0C7 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
AMBRA1Q9C0C7 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
AMBRA1Q9C0C7 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
AMBRA1Q9C0C7 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC14.05□□□□□ -0.16
AMBRA1Q9C0C7 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
AMBRA1Q9C0C7 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
AMBRA1Q9C0C7 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
AMBRA1Q9C0C7 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
AMBRA1Q9C0C7 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC14.05□□□□□ -0.16
AMBRA1Q9C0C7 MRPS18AP1-201ENST00000414458 589 ntBASIC14.05□□□□□ -0.16
AMBRA1Q9C0C7 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
AMBRA1Q9C0C7 AL512638.1-201ENST00000457493 794 ntBASIC14.05□□□□□ -0.16
AMBRA1Q9C0C7 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC14.05□□□□□ -0.16
AMBRA1Q9C0C7 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC14.05□□□□□ -0.16
AMBRA1Q9C0C7 POLD4-211ENST00000539074 714 ntTSL 3 BASIC14.05□□□□□ -0.16
AMBRA1Q9C0C7 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC14.05□□□□□ -0.16
AMBRA1Q9C0C7 AC044860.1-202ENST00000559481 777 ntBASIC14.05□□□□□ -0.16
AMBRA1Q9C0C7 SSH2-210ENST00000582084 560 ntTSL 3 BASIC14.05□□□□□ -0.16
AMBRA1Q9C0C7 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
AMBRA1Q9C0C7 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC14.05□□□□□ -0.16
AMBRA1Q9C0C7 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
AMBRA1Q9C0C7 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
AMBRA1Q9C0C7 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
AMBRA1Q9C0C7 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
AMBRA1Q9C0C7 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
AMBRA1Q9C0C7 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
AMBRA1Q9C0C7 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC14.05□□□□□ -0.16
AMBRA1Q9C0C7 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
AMBRA1Q9C0C7 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC14.05□□□□□ -0.16
AMBRA1Q9C0C7 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
AMBRA1Q9C0C7 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
AMBRA1Q9C0C7 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC14.05□□□□□ -0.16
AMBRA1Q9C0C7 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC14.05□□□□□ -0.16
AMBRA1Q9C0C7 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
AMBRA1Q9C0C7 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
AMBRA1Q9C0C7 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
AMBRA1Q9C0C7 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
AMBRA1Q9C0C7 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
AMBRA1Q9C0C7 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC14.04□□□□□ -0.16
AMBRA1Q9C0C7 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC14.04□□□□□ -0.16
AMBRA1Q9C0C7 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC14.04□□□□□ -0.16
AMBRA1Q9C0C7 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
AMBRA1Q9C0C7 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
AMBRA1Q9C0C7 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC14.04□□□□□ -0.16
AMBRA1Q9C0C7 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
AMBRA1Q9C0C7 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
AMBRA1Q9C0C7 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
AMBRA1Q9C0C7 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC14.04□□□□□ -0.16
AMBRA1Q9C0C7 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
AMBRA1Q9C0C7 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
AMBRA1Q9C0C7 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
AMBRA1Q9C0C7 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
AMBRA1Q9C0C7 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC14.04□□□□□ -0.16
AMBRA1Q9C0C7 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC14.04□□□□□ -0.16
AMBRA1Q9C0C7 HNRNPA1P40-201ENST00000426371 1278 ntBASIC14.04□□□□□ -0.16
AMBRA1Q9C0C7 FAM207CP-201ENST00000443486 507 ntBASIC14.04□□□□□ -0.16
AMBRA1Q9C0C7 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC14.04□□□□□ -0.16
AMBRA1Q9C0C7 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC14.04□□□□□ -0.16
AMBRA1Q9C0C7 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC14.04□□□□□ -0.16
AMBRA1Q9C0C7 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC14.04□□□□□ -0.16
AMBRA1Q9C0C7 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC14.04□□□□□ -0.16
AMBRA1Q9C0C7 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms