Protein–RNA interactions for Protein: Q9C056

NKX6-2, Homeobox protein Nkx-6.2, humanhuman

Predicted RBP Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-2Q9C056 GRM1-202ENST00000355289 3874 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
NKX6-2Q9C056 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
NKX6-2Q9C056 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
NKX6-2Q9C056 KCNMA1-291ENST00000640834 3664 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
NKX6-2Q9C056 BCAP29-201ENST00000005259 4572 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
NKX6-2Q9C056 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
NKX6-2Q9C056 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
NKX6-2Q9C056 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
NKX6-2Q9C056 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
NKX6-2Q9C056 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
NKX6-2Q9C056 PCED1CP-201ENST00000419887 785 ntBASIC12.17□□□□□ -0.46
NKX6-2Q9C056 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC12.17□□□□□ -0.46
NKX6-2Q9C056 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC12.17□□□□□ -0.46
NKX6-2Q9C056 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
NKX6-2Q9C056 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC12.17□□□□□ -0.46
NKX6-2Q9C056 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC12.17□□□□□ -0.46
NKX6-2Q9C056 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC12.17□□□□□ -0.46
NKX6-2Q9C056 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC12.17□□□□□ -0.46
NKX6-2Q9C056 BCL10-202ENST00000620248 774 ntTSL 5 BASIC12.17□□□□□ -0.46
NKX6-2Q9C056 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC12.17□□□□□ -0.46
NKX6-2Q9C056 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC12.17□□□□□ -0.46
NKX6-2Q9C056 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC12.17□□□□□ -0.46
NKX6-2Q9C056 KRT42P-202ENST00000438131 2895 ntTSL 2 BASIC12.17□□□□□ -0.46
NKX6-2Q9C056 NUP160-201ENST00000378460 5376 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
NKX6-2Q9C056 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC12.17□□□□□ -0.46
NKX6-2Q9C056 AC022400.8-201ENST00000623453 3599 ntBASIC12.17□□□□□ -0.46
NKX6-2Q9C056 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
NKX6-2Q9C056 GPR107-208ENST00000610997 2813 ntTSL 5 BASIC12.17□□□□□ -0.46
NKX6-2Q9C056 KDM2B-215ENST00000542973 3170 ntTSL 2 BASIC12.17□□□□□ -0.46
NKX6-2Q9C056 VILL-201ENST00000283713 2970 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
NKX6-2Q9C056 ARHGEF2-201ENST00000313667 2958 ntAPPRIS ALT1 TSL 1 (best) BASIC12.17□□□□□ -0.46
NKX6-2Q9C056 HERC3-203ENST00000407637 2634 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
NKX6-2Q9C056 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC12.17□□□□□ -0.46
NKX6-2Q9C056 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC12.17□□□□□ -0.46
NKX6-2Q9C056 AL445209.1-201ENST00000607269 3491 ntBASIC12.17□□□□□ -0.46
NKX6-2Q9C056 SMOC2-202ENST00000356284 3117 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
NKX6-2Q9C056 TMEM57-201ENST00000374343 3917 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
NKX6-2Q9C056 TCAM1P-207ENST00000485295 1537 ntBASIC12.16□□□□□ -0.46
NKX6-2Q9C056 FAM214B-208ENST00000605244 3016 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
NKX6-2Q9C056 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
NKX6-2Q9C056 DLX4-206ENST00000611342 1662 ntBASIC12.16□□□□□ -0.46
NKX6-2Q9C056 TKT-203ENST00000423525 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
NKX6-2Q9C056 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
NKX6-2Q9C056 SF1-209ENST00000433274 2317 ntTSL 2 BASIC12.16□□□□□ -0.46
NKX6-2Q9C056 PDE4A-204ENST00000440014 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
NKX6-2Q9C056 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
NKX6-2Q9C056 AC018892.3-201ENST00000623986 2499 ntBASIC12.16□□□□□ -0.46
NKX6-2Q9C056 SAMD14-202ENST00000330175 4425 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
NKX6-2Q9C056 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
NKX6-2Q9C056 ASCC3-203ENST00000369143 3433 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
NKX6-2Q9C056 HTR5A-201ENST00000287907 2912 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
NKX6-2Q9C056 CC2D1A-201ENST00000318003 3581 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
NKX6-2Q9C056 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
NKX6-2Q9C056 KHSRPP1-201ENST00000427983 1768 ntBASIC12.16□□□□□ -0.46
NKX6-2Q9C056 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC12.16□□□□□ -0.46
NKX6-2Q9C056 COPS7B-203ENST00000373608 2563 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
NKX6-2Q9C056 SLC26A6-205ENST00000395550 2589 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
NKX6-2Q9C056 COL6A3-203ENST00000353578 9963 ntTSL 5 BASIC12.16□□□□□ -0.46
NKX6-2Q9C056 C10orf105-202ENST00000441508 4836 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
NKX6-2Q9C056 ARHGAP45-210ENST00000590214 4191 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
NKX6-2Q9C056 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC12.16□□□□□ -0.46
NKX6-2Q9C056 TRAF3IP3-204ENST00000367026 2058 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
NKX6-2Q9C056 BET1L-202ENST00000332865 533 ntTSL 5 BASIC12.16□□□□□ -0.46
NKX6-2Q9C056 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC12.16□□□□□ -0.46
NKX6-2Q9C056 KRT18P27-201ENST00000427733 1299 ntBASIC12.16□□□□□ -0.46
NKX6-2Q9C056 DUSP5P1-201ENST00000441325 1139 ntBASIC12.16□□□□□ -0.46
NKX6-2Q9C056 FGFR3P6-201ENST00000457012 610 ntBASIC12.16□□□□□ -0.46
NKX6-2Q9C056 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
NKX6-2Q9C056 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC12.16□□□□□ -0.46
NKX6-2Q9C056 CIPC-205ENST00000555437 566 ntTSL 3 BASIC12.16□□□□□ -0.46
NKX6-2Q9C056 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC12.16□□□□□ -0.46
NKX6-2Q9C056 IRF8-202ENST00000562492 946 ntTSL 3 BASIC12.16□□□□□ -0.46
NKX6-2Q9C056 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC12.16□□□□□ -0.46
NKX6-2Q9C056 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC12.16□□□□□ -0.46
NKX6-2Q9C056 MIR4313-201ENST00000580760 101 ntBASIC12.16□□□□□ -0.46
NKX6-2Q9C056 AC024267.1-201ENST00000582320 895 ntBASIC12.16□□□□□ -0.46
NKX6-2Q9C056 AC008608.2-201ENST00000606089 416 ntBASIC12.16□□□□□ -0.46
NKX6-2Q9C056 FHL2-212ENST00000607522 759 ntTSL 2 BASIC12.16□□□□□ -0.46
NKX6-2Q9C056 AL078644.1-201ENST00000609881 752 ntBASIC12.16□□□□□ -0.46
NKX6-2Q9C056 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC12.16□□□□□ -0.46
NKX6-2Q9C056 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
NKX6-2Q9C056 FLAD1-207ENST00000368433 2656 ntTSL 2 BASIC12.16□□□□□ -0.46
NKX6-2Q9C056 EMILIN1-201ENST00000380320 3943 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
NKX6-2Q9C056 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
NKX6-2Q9C056 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
NKX6-2Q9C056 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
NKX6-2Q9C056 MAMDC4-201ENST00000317446 3658 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
NKX6-2Q9C056 PTK2-202ENST00000395218 4415 ntTSL 5 BASIC12.16□□□□□ -0.46
NKX6-2Q9C056 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
NKX6-2Q9C056 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC12.16□□□□□ -0.46
NKX6-2Q9C056 ACSL4-202ENST00000348502 5032 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
NKX6-2Q9C056 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC12.16□□□□□ -0.46
NKX6-2Q9C056 ELP4-203ENST00000395934 1961 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
NKX6-2Q9C056 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
NKX6-2Q9C056 ARAP3-203ENST00000508305 4927 ntTSL 2 BASIC12.15□□□□□ -0.46
NKX6-2Q9C056 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC12.15□□□□□ -0.46
NKX6-2Q9C056 SNX25-201ENST00000264694 3264 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
NKX6-2Q9C056 SMPDL3B-206ENST00000549094 1611 ntTSL 5 BASIC12.15□□□□□ -0.46
NKX6-2Q9C056 SUGP2-203ENST00000452918 6176 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
NKX6-2Q9C056 TRDMT1-203ENST00000377799 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 65.7 ms