Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SSBP3Q9BWW4 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
SSBP3Q9BWW4 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
SSBP3Q9BWW4 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
SSBP3Q9BWW4 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
SSBP3Q9BWW4 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SSBP3Q9BWW4 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC12.55□□□□□ -0.4
SSBP3Q9BWW4 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SSBP3Q9BWW4 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC12.55□□□□□ -0.4
SSBP3Q9BWW4 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC12.55□□□□□ -0.4
SSBP3Q9BWW4 ANKRD30BP2-201ENST00000435744 1610 ntBASIC12.55□□□□□ -0.4
SSBP3Q9BWW4 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SSBP3Q9BWW4 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC12.54□□□□□ -0.4
SSBP3Q9BWW4 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SSBP3Q9BWW4 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC12.54□□□□□ -0.4
SSBP3Q9BWW4 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
SSBP3Q9BWW4 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SSBP3Q9BWW4 AC106881.1-201ENST00000605849 3329 ntBASIC12.54□□□□□ -0.4
SSBP3Q9BWW4 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SSBP3Q9BWW4 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC12.54□□□□□ -0.4
SSBP3Q9BWW4 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SSBP3Q9BWW4 AC139749.1-202ENST00000617529 3139 ntBASIC12.54□□□□□ -0.4
SSBP3Q9BWW4 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC12.54□□□□□ -0.4
SSBP3Q9BWW4 AL359258.3-201ENST00000622910 2331 ntBASIC12.54□□□□□ -0.4
SSBP3Q9BWW4 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
SSBP3Q9BWW4 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SSBP3Q9BWW4 REXO1L6P-201ENST00000603433 1515 ntBASIC12.54□□□□□ -0.4
SSBP3Q9BWW4 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
SSBP3Q9BWW4 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
SSBP3Q9BWW4 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC12.54□□□□□ -0.4
SSBP3Q9BWW4 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SSBP3Q9BWW4 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC12.54□□□□□ -0.4
SSBP3Q9BWW4 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SSBP3Q9BWW4 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SSBP3Q9BWW4 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
SSBP3Q9BWW4 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SSBP3Q9BWW4 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
SSBP3Q9BWW4 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
SSBP3Q9BWW4 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
SSBP3Q9BWW4 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC12.54□□□□□ -0.4
SSBP3Q9BWW4 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC12.54□□□□□ -0.4
SSBP3Q9BWW4 RN7SL560P-201ENST00000577943 264 ntBASIC12.54□□□□□ -0.4
SSBP3Q9BWW4 RN7SL219P-201ENST00000582872 296 ntBASIC12.54□□□□□ -0.4
SSBP3Q9BWW4 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC12.54□□□□□ -0.4
SSBP3Q9BWW4 AC009542.2-202ENST00000619004 1067 ntBASIC12.54□□□□□ -0.4
SSBP3Q9BWW4 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SSBP3Q9BWW4 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
SSBP3Q9BWW4 PGR-210ENST00000619228 3038 ntTSL 5 BASIC12.54□□□□□ -0.4
SSBP3Q9BWW4 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SSBP3Q9BWW4 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SSBP3Q9BWW4 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC12.54□□□□□ -0.4
SSBP3Q9BWW4 AL137783.1-201ENST00000623494 1896 ntBASIC12.54□□□□□ -0.4
SSBP3Q9BWW4 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC12.54□□□□□ -0.4
SSBP3Q9BWW4 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
SSBP3Q9BWW4 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SSBP3Q9BWW4 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC12.54□□□□□ -0.4
SSBP3Q9BWW4 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
SSBP3Q9BWW4 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SSBP3Q9BWW4 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SSBP3Q9BWW4 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
SSBP3Q9BWW4 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC12.54□□□□□ -0.4
SSBP3Q9BWW4 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC12.54□□□□□ -0.4
SSBP3Q9BWW4 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
SSBP3Q9BWW4 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
SSBP3Q9BWW4 WASH3P-207ENST00000560956 1394 ntBASIC12.54□□□□□ -0.4
SSBP3Q9BWW4 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SSBP3Q9BWW4 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SSBP3Q9BWW4 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SSBP3Q9BWW4 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC12.54□□□□□ -0.4
SSBP3Q9BWW4 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SSBP3Q9BWW4 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC12.54□□□□□ -0.4
SSBP3Q9BWW4 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SSBP3Q9BWW4 RER1-203ENST00000378513 3000 ntTSL 3 BASIC12.54□□□□□ -0.4
SSBP3Q9BWW4 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
SSBP3Q9BWW4 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
SSBP3Q9BWW4 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
SSBP3Q9BWW4 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SSBP3Q9BWW4 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC12.53□□□□□ -0.4
SSBP3Q9BWW4 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC12.53□□□□□ -0.4
SSBP3Q9BWW4 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SSBP3Q9BWW4 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SSBP3Q9BWW4 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
SSBP3Q9BWW4 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC12.53□□□□□ -0.4
SSBP3Q9BWW4 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SSBP3Q9BWW4 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
SSBP3Q9BWW4 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
SSBP3Q9BWW4 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
SSBP3Q9BWW4 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC12.53□□□□□ -0.4
SSBP3Q9BWW4 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
SSBP3Q9BWW4 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SSBP3Q9BWW4 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
SSBP3Q9BWW4 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
SSBP3Q9BWW4 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
SSBP3Q9BWW4 SNX21-203ENST00000372541 771 ntTSL 2 BASIC12.53□□□□□ -0.4
SSBP3Q9BWW4 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
SSBP3Q9BWW4 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC12.53□□□□□ -0.4
SSBP3Q9BWW4 POM121L8P-201ENST00000417732 1281 ntBASIC12.53□□□□□ -0.4
SSBP3Q9BWW4 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC12.53□□□□□ -0.4
SSBP3Q9BWW4 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC12.53□□□□□ -0.4
SSBP3Q9BWW4 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms