Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC18.07■□□□□ 0.48
RPAP1Q9BWH6 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC18.07■□□□□ 0.48
RPAP1Q9BWH6 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC18.07■□□□□ 0.48
RPAP1Q9BWH6 NAT9-222ENST00000583476 583 ntTSL 3 BASIC18.07■□□□□ 0.48
RPAP1Q9BWH6 AC004466.1-201ENST00000599515 1080 ntBASIC18.07■□□□□ 0.48
RPAP1Q9BWH6 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
RPAP1Q9BWH6 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
RPAP1Q9BWH6 AC015967.2-201ENST00000624092 234 ntBASIC18.07■□□□□ 0.48
RPAP1Q9BWH6 AC006435.4-201ENST00000625037 234 ntBASIC18.07■□□□□ 0.48
RPAP1Q9BWH6 AL356737.1-201ENST00000634391 234 ntBASIC18.07■□□□□ 0.48
RPAP1Q9BWH6 AMT-204ENST00000427987 1646 ntTSL 5 BASIC18.07■□□□□ 0.48
RPAP1Q9BWH6 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
RPAP1Q9BWH6 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
RPAP1Q9BWH6 AL137783.1-201ENST00000623494 1896 ntBASIC18.07■□□□□ 0.48
RPAP1Q9BWH6 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
RPAP1Q9BWH6 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC18.07■□□□□ 0.48
RPAP1Q9BWH6 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC18.07■□□□□ 0.48
RPAP1Q9BWH6 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC18.07■□□□□ 0.48
RPAP1Q9BWH6 NID2-208ENST00000617139 3827 ntTSL 5 BASIC18.07■□□□□ 0.48
RPAP1Q9BWH6 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RPAP1Q9BWH6 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
RPAP1Q9BWH6 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RPAP1Q9BWH6 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
RPAP1Q9BWH6 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
RPAP1Q9BWH6 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
RPAP1Q9BWH6 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
RPAP1Q9BWH6 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RPAP1Q9BWH6 GRK6P1-201ENST00000400595 1711 ntBASIC18.07■□□□□ 0.48
RPAP1Q9BWH6 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RPAP1Q9BWH6 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RPAP1Q9BWH6 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RPAP1Q9BWH6 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RPAP1Q9BWH6 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
RPAP1Q9BWH6 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RPAP1Q9BWH6 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
RPAP1Q9BWH6 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC18.06■□□□□ 0.48
RPAP1Q9BWH6 SMS-201ENST00000379404 1174 ntTSL 3 BASIC18.06■□□□□ 0.48
RPAP1Q9BWH6 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC18.06■□□□□ 0.48
RPAP1Q9BWH6 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
RPAP1Q9BWH6 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
RPAP1Q9BWH6 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC18.06■□□□□ 0.48
RPAP1Q9BWH6 FNTAP2-201ENST00000430308 634 ntBASIC18.06■□□□□ 0.48
RPAP1Q9BWH6 CHMP1AP1-201ENST00000445563 662 ntBASIC18.06■□□□□ 0.48
RPAP1Q9BWH6 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC18.06■□□□□ 0.48
RPAP1Q9BWH6 AC026434.2-201ENST00000506094 1078 ntBASIC18.06■□□□□ 0.48
RPAP1Q9BWH6 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC18.06■□□□□ 0.48
RPAP1Q9BWH6 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC18.06■□□□□ 0.48
RPAP1Q9BWH6 AC007663.3-201ENST00000609632 465 ntBASIC18.06■□□□□ 0.48
RPAP1Q9BWH6 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC18.06■□□□□ 0.48
RPAP1Q9BWH6 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC18.06■□□□□ 0.48
RPAP1Q9BWH6 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC18.06■□□□□ 0.48
RPAP1Q9BWH6 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC18.06■□□□□ 0.48
RPAP1Q9BWH6 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC18.06■□□□□ 0.48
RPAP1Q9BWH6 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
RPAP1Q9BWH6 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
RPAP1Q9BWH6 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC18.06■□□□□ 0.48
RPAP1Q9BWH6 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RPAP1Q9BWH6 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
RPAP1Q9BWH6 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC18.06■□□□□ 0.48
RPAP1Q9BWH6 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
RPAP1Q9BWH6 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
RPAP1Q9BWH6 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
RPAP1Q9BWH6 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC18.06■□□□□ 0.48
RPAP1Q9BWH6 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC18.06■□□□□ 0.48
RPAP1Q9BWH6 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RPAP1Q9BWH6 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
RPAP1Q9BWH6 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
RPAP1Q9BWH6 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC18.05■□□□□ 0.48
RPAP1Q9BWH6 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
RPAP1Q9BWH6 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RPAP1Q9BWH6 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RPAP1Q9BWH6 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RPAP1Q9BWH6 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
RPAP1Q9BWH6 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RPAP1Q9BWH6 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RPAP1Q9BWH6 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
RPAP1Q9BWH6 DEF8-202ENST00000418391 852 ntTSL 2 BASIC18.05■□□□□ 0.48
RPAP1Q9BWH6 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC18.05■□□□□ 0.48
RPAP1Q9BWH6 HNRNPA1P63-201ENST00000427917 963 ntBASIC18.05■□□□□ 0.48
RPAP1Q9BWH6 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC18.05■□□□□ 0.48
RPAP1Q9BWH6 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC18.05■□□□□ 0.48
RPAP1Q9BWH6 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC18.05■□□□□ 0.48
RPAP1Q9BWH6 CHMP4BP1-201ENST00000556017 588 ntBASIC18.05■□□□□ 0.48
RPAP1Q9BWH6 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC18.05■□□□□ 0.48
RPAP1Q9BWH6 AC023090.2-201ENST00000625182 2110 ntBASIC18.05■□□□□ 0.48
RPAP1Q9BWH6 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RPAP1Q9BWH6 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
RPAP1Q9BWH6 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC18.05■□□□□ 0.48
RPAP1Q9BWH6 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC18.05■□□□□ 0.48
RPAP1Q9BWH6 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RPAP1Q9BWH6 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RPAP1Q9BWH6 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC18.05■□□□□ 0.48
RPAP1Q9BWH6 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
RPAP1Q9BWH6 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
RPAP1Q9BWH6 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
RPAP1Q9BWH6 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
RPAP1Q9BWH6 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC18.05■□□□□ 0.48
RPAP1Q9BWH6 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
RPAP1Q9BWH6 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
RPAP1Q9BWH6 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms