Protein–RNA interactions for Protein: Q9BU40

CHRDL1, Chordin-like protein 1, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL1Q9BU40 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC12□□□□□ -0.49
CHRDL1Q9BU40 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC12□□□□□ -0.49
CHRDL1Q9BU40 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CHRDL1Q9BU40 PLXNB1-201ENST00000296440 7143 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
CHRDL1Q9BU40 MADD-203ENST00000349238 5873 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
CHRDL1Q9BU40 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC11.99□□□□□ -0.49
CHRDL1Q9BU40 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
CHRDL1Q9BU40 ALCAM-201ENST00000306107 4701 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CHRDL1Q9BU40 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
CHRDL1Q9BU40 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CHRDL1Q9BU40 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC11.99□□□□□ -0.49
CHRDL1Q9BU40 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
CHRDL1Q9BU40 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC11.99□□□□□ -0.49
CHRDL1Q9BU40 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
CHRDL1Q9BU40 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
CHRDL1Q9BU40 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
CHRDL1Q9BU40 WLS-201ENST00000262348 2748 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CHRDL1Q9BU40 NEK9-201ENST00000238616 8310 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CHRDL1Q9BU40 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CHRDL1Q9BU40 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC11.99□□□□□ -0.49
CHRDL1Q9BU40 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC11.99□□□□□ -0.49
CHRDL1Q9BU40 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CHRDL1Q9BU40 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
CHRDL1Q9BU40 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
CHRDL1Q9BU40 MORC4-202ENST00000355610 3834 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
CHRDL1Q9BU40 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
CHRDL1Q9BU40 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
CHRDL1Q9BU40 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
CHRDL1Q9BU40 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC11.99□□□□□ -0.49
CHRDL1Q9BU40 AC093214.1-201ENST00000511688 1107 ntBASIC11.99□□□□□ -0.49
CHRDL1Q9BU40 RFPL4AP1-201ENST00000530883 850 ntBASIC11.99□□□□□ -0.49
CHRDL1Q9BU40 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC11.99□□□□□ -0.49
CHRDL1Q9BU40 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC11.99□□□□□ -0.49
CHRDL1Q9BU40 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC11.99□□□□□ -0.49
CHRDL1Q9BU40 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC11.99□□□□□ -0.49
CHRDL1Q9BU40 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC11.99□□□□□ -0.49
CHRDL1Q9BU40 ADCYAP1R1-201ENST00000304166 6487 ntAPPRIS P3 TSL 2 BASIC11.99□□□□□ -0.49
CHRDL1Q9BU40 GRK3-201ENST00000324198 9103 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CHRDL1Q9BU40 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC11.99□□□□□ -0.49
CHRDL1Q9BU40 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CHRDL1Q9BU40 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
CHRDL1Q9BU40 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC11.99□□□□□ -0.49
CHRDL1Q9BU40 MSRB3-202ENST00000355192 4289 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
CHRDL1Q9BU40 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
CHRDL1Q9BU40 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CHRDL1Q9BU40 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC11.99□□□□□ -0.49
CHRDL1Q9BU40 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CHRDL1Q9BU40 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC11.99□□□□□ -0.49
CHRDL1Q9BU40 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC11.99□□□□□ -0.49
CHRDL1Q9BU40 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CHRDL1Q9BU40 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC11.99□□□□□ -0.49
CHRDL1Q9BU40 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC11.99□□□□□ -0.49
CHRDL1Q9BU40 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
CHRDL1Q9BU40 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC11.99□□□□□ -0.49
CHRDL1Q9BU40 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CHRDL1Q9BU40 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC11.99□□□□□ -0.49
CHRDL1Q9BU40 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CHRDL1Q9BU40 ARHGEF37-201ENST00000333677 4968 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
CHRDL1Q9BU40 PER3-201ENST00000361923 6203 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
CHRDL1Q9BU40 ARHGAP31-201ENST00000264245 9317 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CHRDL1Q9BU40 FLT4-201ENST00000261937 5857 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CHRDL1Q9BU40 EPHB1-201ENST00000398015 4672 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CHRDL1Q9BU40 VCP-201ENST00000358901 4370 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CHRDL1Q9BU40 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CHRDL1Q9BU40 ABR-228ENST00000574437 3196 ntTSL 5 BASIC11.98□□□□□ -0.49
CHRDL1Q9BU40 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC11.98□□□□□ -0.49
CHRDL1Q9BU40 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
CHRDL1Q9BU40 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
CHRDL1Q9BU40 AC041040.2-201ENST00000622926 2899 ntBASIC11.98□□□□□ -0.49
CHRDL1Q9BU40 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
CHRDL1Q9BU40 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC11.98□□□□□ -0.49
CHRDL1Q9BU40 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
CHRDL1Q9BU40 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
CHRDL1Q9BU40 COCH-203ENST00000460581 2688 ntTSL 2 BASIC11.98□□□□□ -0.49
CHRDL1Q9BU40 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
CHRDL1Q9BU40 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC11.98□□□□□ -0.49
CHRDL1Q9BU40 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CHRDL1Q9BU40 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
CHRDL1Q9BU40 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC11.98□□□□□ -0.49
CHRDL1Q9BU40 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
CHRDL1Q9BU40 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
CHRDL1Q9BU40 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC11.98□□□□□ -0.49
CHRDL1Q9BU40 BTBD9-206ENST00000481247 8525 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
CHRDL1Q9BU40 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CHRDL1Q9BU40 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC11.98□□□□□ -0.49
CHRDL1Q9BU40 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC11.98□□□□□ -0.49
CHRDL1Q9BU40 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC11.98□□□□□ -0.49
CHRDL1Q9BU40 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CHRDL1Q9BU40 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC11.98□□□□□ -0.49
CHRDL1Q9BU40 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC11.98□□□□□ -0.49
CHRDL1Q9BU40 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CHRDL1Q9BU40 CEP126-201ENST00000263468 7039 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
CHRDL1Q9BU40 PKIG-203ENST00000372887 769 ntTSL 3 BASIC11.98□□□□□ -0.49
CHRDL1Q9BU40 GGCT-205ENST00000409436 954 ntTSL 3 BASIC11.98□□□□□ -0.49
CHRDL1Q9BU40 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC11.98□□□□□ -0.49
CHRDL1Q9BU40 PMS2P2-201ENST00000425039 1128 ntBASIC11.98□□□□□ -0.49
CHRDL1Q9BU40 GHSR-202ENST00000427970 912 ntBASIC11.98□□□□□ -0.49
CHRDL1Q9BU40 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC11.98□□□□□ -0.49
CHRDL1Q9BU40 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC11.98□□□□□ -0.49
CHRDL1Q9BU40 MEIS3P1-201ENST00000495167 958 ntBASIC11.98□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 258 ms