Protein–RNA interactions for Protein: Q99616

CCL13, C-C motif chemokine 13, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL13Q99616 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
CCL13Q99616 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CCL13Q99616 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CCL13Q99616 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
CCL13Q99616 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC12.56□□□□□ -0.4
CCL13Q99616 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
CCL13Q99616 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC12.56□□□□□ -0.4
CCL13Q99616 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
CCL13Q99616 AC103702.1-201ENST00000548801 2630 ntBASIC12.56□□□□□ -0.4
CCL13Q99616 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
CCL13Q99616 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
CCL13Q99616 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC12.56□□□□□ -0.4
CCL13Q99616 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CCL13Q99616 POM121L8P-201ENST00000417732 1281 ntBASIC12.56□□□□□ -0.4
CCL13Q99616 WBP2-203ENST00000433525 928 ntTSL 2 BASIC12.56□□□□□ -0.4
CCL13Q99616 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC12.56□□□□□ -0.4
CCL13Q99616 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC12.56□□□□□ -0.4
CCL13Q99616 POM121L9P-203ENST00000441984 1285 ntBASIC12.56□□□□□ -0.4
CCL13Q99616 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC12.56□□□□□ -0.4
CCL13Q99616 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC12.56□□□□□ -0.4
CCL13Q99616 AC078819.1-201ENST00000547454 765 ntBASIC12.56□□□□□ -0.4
CCL13Q99616 AC012085.1-201ENST00000548270 765 ntBASIC12.56□□□□□ -0.4
CCL13Q99616 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CCL13Q99616 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
CCL13Q99616 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC12.56□□□□□ -0.4
CCL13Q99616 RPS24-214ENST00000613865 538 ntTSL 5 BASIC12.56□□□□□ -0.4
CCL13Q99616 WNT11-204ENST00000621122 789 ntTSL 5 BASIC12.56□□□□□ -0.4
CCL13Q99616 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CCL13Q99616 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
CCL13Q99616 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
CCL13Q99616 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC12.56□□□□□ -0.4
CCL13Q99616 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
CCL13Q99616 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC12.56□□□□□ -0.4
CCL13Q99616 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC12.56□□□□□ -0.4
CCL13Q99616 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
CCL13Q99616 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CCL13Q99616 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC12.56□□□□□ -0.4
CCL13Q99616 CICP24-201ENST00000605464 2705 ntBASIC12.56□□□□□ -0.4
CCL13Q99616 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
CCL13Q99616 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CCL13Q99616 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CCL13Q99616 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CCL13Q99616 CLUHP2-201ENST00000426660 1303 ntBASIC12.56□□□□□ -0.4
CCL13Q99616 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC12.56□□□□□ -0.4
CCL13Q99616 AC023824.1-201ENST00000562945 2975 ntBASIC12.56□□□□□ -0.4
CCL13Q99616 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
CCL13Q99616 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CCL13Q99616 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC12.56□□□□□ -0.4
CCL13Q99616 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
CCL13Q99616 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CCL13Q99616 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC12.56□□□□□ -0.4
CCL13Q99616 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
CCL13Q99616 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CCL13Q99616 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CCL13Q99616 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CCL13Q99616 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CCL13Q99616 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CCL13Q99616 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC12.55□□□□□ -0.4
CCL13Q99616 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CCL13Q99616 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CCL13Q99616 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC12.55□□□□□ -0.4
CCL13Q99616 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CCL13Q99616 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CCL13Q99616 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC12.55□□□□□ -0.4
CCL13Q99616 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC12.55□□□□□ -0.4
CCL13Q99616 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CCL13Q99616 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CCL13Q99616 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
CCL13Q99616 AC015656.1-201ENST00000624209 3578 ntBASIC12.55□□□□□ -0.4
CCL13Q99616 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC12.55□□□□□ -0.4
CCL13Q99616 MIR1909-201ENST00000411312 80 ntBASIC12.55□□□□□ -0.4
CCL13Q99616 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
CCL13Q99616 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC12.55□□□□□ -0.4
CCL13Q99616 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC12.55□□□□□ -0.4
CCL13Q99616 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC12.55□□□□□ -0.4
CCL13Q99616 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC12.55□□□□□ -0.4
CCL13Q99616 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC12.55□□□□□ -0.4
CCL13Q99616 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
CCL13Q99616 AC104989.1-201ENST00000519711 778 ntBASIC12.55□□□□□ -0.4
CCL13Q99616 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC12.55□□□□□ -0.4
CCL13Q99616 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
CCL13Q99616 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC12.55□□□□□ -0.4
CCL13Q99616 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC12.55□□□□□ -0.4
CCL13Q99616 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CCL13Q99616 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC12.55□□□□□ -0.4
CCL13Q99616 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC12.55□□□□□ -0.4
CCL13Q99616 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC12.55□□□□□ -0.4
CCL13Q99616 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC12.55□□□□□ -0.4
CCL13Q99616 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CCL13Q99616 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
CCL13Q99616 CICP14-201ENST00000629111 2732 ntBASIC12.55□□□□□ -0.4
CCL13Q99616 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CCL13Q99616 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
CCL13Q99616 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CCL13Q99616 API5-203ENST00000455725 2257 ntTSL 2 BASIC12.55□□□□□ -0.4
CCL13Q99616 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CCL13Q99616 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CCL13Q99616 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC12.55□□□□□ -0.4
CCL13Q99616 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CCL13Q99616 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 57.2 ms