Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 AC126755.5-201ENST00000622756 267 ntBASIC23.83■■□□□ 1.41
IFT140Q96RY7 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
IFT140Q96RY7 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC23.83■■□□□ 1.41
IFT140Q96RY7 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC23.83■■□□□ 1.41
IFT140Q96RY7 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC23.83■■□□□ 1.41
IFT140Q96RY7 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC23.83■■□□□ 1.41
IFT140Q96RY7 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.41
IFT140Q96RY7 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
IFT140Q96RY7 RNF34-211ENST00000613529 1449 ntTSL 2 BASIC23.83■■□□□ 1.41
IFT140Q96RY7 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
IFT140Q96RY7 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC23.83■■□□□ 1.41
IFT140Q96RY7 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC23.83■■□□□ 1.4
IFT140Q96RY7 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC23.82■■□□□ 1.4
IFT140Q96RY7 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
IFT140Q96RY7 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC23.82■■□□□ 1.4
IFT140Q96RY7 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC23.82■■□□□ 1.4
IFT140Q96RY7 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
IFT140Q96RY7 KRTAP6-1-201ENST00000329122 500 ntAPPRIS P1 BASIC23.82■■□□□ 1.4
IFT140Q96RY7 WFDC5-202ENST00000372789 1018 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
IFT140Q96RY7 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC23.82■■□□□ 1.4
IFT140Q96RY7 MIR6125-201ENST00000618986 96 ntBASIC23.82■■□□□ 1.4
IFT140Q96RY7 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC23.82■■□□□ 1.4
IFT140Q96RY7 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
IFT140Q96RY7 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
IFT140Q96RY7 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC23.82■■□□□ 1.4
IFT140Q96RY7 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
IFT140Q96RY7 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC23.82■■□□□ 1.4
IFT140Q96RY7 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC23.82■■□□□ 1.4
IFT140Q96RY7 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
IFT140Q96RY7 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
IFT140Q96RY7 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC23.82■■□□□ 1.4
IFT140Q96RY7 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
IFT140Q96RY7 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
IFT140Q96RY7 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
IFT140Q96RY7 IFNA2-201ENST00000380206 1135 ntAPPRIS P1 BASIC23.81■■□□□ 1.4
IFT140Q96RY7 AL137026.2-201ENST00000437014 841 ntTSL 2 BASIC23.81■■□□□ 1.4
IFT140Q96RY7 HNRNPA3P6-201ENST00000472163 1006 ntBASIC23.81■■□□□ 1.4
IFT140Q96RY7 SOX2-OT-209ENST00000485035 561 ntTSL 4 BASIC23.81■■□□□ 1.4
IFT140Q96RY7 AC093300.1-201ENST00000510368 1201 ntBASIC23.81■■□□□ 1.4
IFT140Q96RY7 LY6E-215ENST00000523847 427 ntTSL 3 BASIC23.81■■□□□ 1.4
IFT140Q96RY7 SOX2-OT-222ENST00000595084 853 ntTSL 5 BASIC23.81■■□□□ 1.4
IFT140Q96RY7 SOX2-OT-232ENST00000600386 792 ntTSL 5 BASIC23.81■■□□□ 1.4
IFT140Q96RY7 BX322534.1-201ENST00000635574 241 ntBASIC23.81■■□□□ 1.4
IFT140Q96RY7 AC215524.1-201ENST00000635696 241 ntBASIC23.81■■□□□ 1.4
IFT140Q96RY7 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
IFT140Q96RY7 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
IFT140Q96RY7 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
IFT140Q96RY7 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
IFT140Q96RY7 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC23.81■■□□□ 1.4
IFT140Q96RY7 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC23.81■■□□□ 1.4
IFT140Q96RY7 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC23.81■■□□□ 1.4
IFT140Q96RY7 CSHL1-201ENST00000259003 739 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
IFT140Q96RY7 MORN2-201ENST00000340556 741 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
IFT140Q96RY7 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
IFT140Q96RY7 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
IFT140Q96RY7 KRTAP10-9-201ENST00000397911 1171 ntAPPRIS P2 BASIC23.81■■□□□ 1.4
IFT140Q96RY7 STAG3L3-203ENST00000436857 1033 ntTSL 2 BASIC23.81■■□□□ 1.4
IFT140Q96RY7 CSHL1-206ENST00000450719 973 ntTSL 2 BASIC23.81■■□□□ 1.4
IFT140Q96RY7 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC23.81■■□□□ 1.4
IFT140Q96RY7 VIPAS39-208ENST00000556412 1832 ntTSL 2 BASIC23.81■■□□□ 1.4
IFT140Q96RY7 AC115099.1-201ENST00000570413 362 ntTSL 3 BASIC23.81■■□□□ 1.4
IFT140Q96RY7 ZNF671-203ENST00000596939 977 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
IFT140Q96RY7 AP000356.3-203ENST00000614808 601 ntTSL 3 BASIC23.81■■□□□ 1.4
IFT140Q96RY7 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
IFT140Q96RY7 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
IFT140Q96RY7 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
IFT140Q96RY7 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC23.8■■□□□ 1.4
IFT140Q96RY7 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
IFT140Q96RY7 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
IFT140Q96RY7 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
IFT140Q96RY7 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC23.8■■□□□ 1.4
IFT140Q96RY7 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
IFT140Q96RY7 IZUMO1-201ENST00000332955 1621 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
IFT140Q96RY7 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
IFT140Q96RY7 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
IFT140Q96RY7 AC020931.1-201ENST00000589622 1346 ntBASIC23.8■■□□□ 1.4
IFT140Q96RY7 LINC00887-204ENST00000456816 796 ntTSL 3 BASIC23.8■■□□□ 1.4
IFT140Q96RY7 AC005486.1-201ENST00000466775 216 ntTSL 3 BASIC23.8■■□□□ 1.4
IFT140Q96RY7 AAMDC-207ENST00000527134 693 ntTSL 3 BASIC23.8■■□□□ 1.4
IFT140Q96RY7 LINC00301-203ENST00000527161 749 ntTSL 2 BASIC23.8■■□□□ 1.4
IFT140Q96RY7 SPAG5-AS1-204ENST00000556050 871 ntTSL 2 BASIC23.8■■□□□ 1.4
IFT140Q96RY7 KRT17P4-203ENST00000579355 621 ntTSL 3 BASIC23.8■■□□□ 1.4
IFT140Q96RY7 AL353997.6-201ENST00000583394 621 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
IFT140Q96RY7 AC010531.8-201ENST00000623341 685 ntBASIC23.8■■□□□ 1.4
IFT140Q96RY7 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC23.8■■□□□ 1.4
IFT140Q96RY7 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC23.8■■□□□ 1.4
IFT140Q96RY7 WDR46-231ENST00000374617 2358 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
IFT140Q96RY7 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
IFT140Q96RY7 AC023024.2-201ENST00000623561 1993 ntBASIC23.79■■□□□ 1.4
IFT140Q96RY7 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
IFT140Q96RY7 GOLGA8K-202ENST00000512626 1894 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
IFT140Q96RY7 GOLGA8T-202ENST00000569052 1896 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
IFT140Q96RY7 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC23.79■■□□□ 1.4
IFT140Q96RY7 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
IFT140Q96RY7 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC23.79■■□□□ 1.4
IFT140Q96RY7 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC23.79■■□□□ 1.4
IFT140Q96RY7 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
IFT140Q96RY7 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
IFT140Q96RY7 NCR1-204ENST00000357397 594 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
IFT140Q96RY7 MIR611-201ENST00000384869 67 ntBASIC23.79■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms