Protein–RNA interactions for Protein: Q96M43

NBPF4, Neuroblastoma breakpoint family member 4, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NBPF4Q96M43 AP002803.1-201ENST00000528836 498 ntBASIC19.42■□□□□ 0.7
NBPF4Q96M43 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC19.42■□□□□ 0.7
NBPF4Q96M43 DNM1P30-201ENST00000563586 452 ntBASIC19.42■□□□□ 0.7
NBPF4Q96M43 TMEM219-204ENST00000566848 1292 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NBPF4Q96M43 AC020763.1-201ENST00000567186 551 ntTSL 4 BASIC19.42■□□□□ 0.7
NBPF4Q96M43 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NBPF4Q96M43 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC19.42■□□□□ 0.7
NBPF4Q96M43 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
NBPF4Q96M43 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
NBPF4Q96M43 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
NBPF4Q96M43 LINC00554-201ENST00000564841 3011 ntBASIC19.42■□□□□ 0.7
NBPF4Q96M43 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
NBPF4Q96M43 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NBPF4Q96M43 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NBPF4Q96M43 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC19.42■□□□□ 0.7
NBPF4Q96M43 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
NBPF4Q96M43 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
NBPF4Q96M43 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
NBPF4Q96M43 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC19.41■□□□□ 0.7
NBPF4Q96M43 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC19.41■□□□□ 0.7
NBPF4Q96M43 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC19.41■□□□□ 0.7
NBPF4Q96M43 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
NBPF4Q96M43 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
NBPF4Q96M43 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NBPF4Q96M43 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC19.41■□□□□ 0.7
NBPF4Q96M43 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
NBPF4Q96M43 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC19.41■□□□□ 0.7
NBPF4Q96M43 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
NBPF4Q96M43 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
NBPF4Q96M43 PIK3IP1-202ENST00000402249 999 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
NBPF4Q96M43 ZNF226-203ENST00000413984 716 ntTSL 3 BASIC19.41■□□□□ 0.7
NBPF4Q96M43 HPGD-203ENST00000422112 805 ntTSL 2 BASIC19.41■□□□□ 0.7
NBPF4Q96M43 AL365295.1-203ENST00000435322 566 ntTSL 4 BASIC19.41■□□□□ 0.7
NBPF4Q96M43 LINC00466-203ENST00000436475 1059 ntTSL 5 BASIC19.41■□□□□ 0.7
NBPF4Q96M43 LINC01806-201ENST00000436506 765 ntTSL 2 BASIC19.41■□□□□ 0.7
NBPF4Q96M43 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
NBPF4Q96M43 SAP30L-203ENST00000440364 792 ntTSL 3 BASIC19.41■□□□□ 0.7
NBPF4Q96M43 AC130709.1-201ENST00000484779 1212 ntBASIC19.41■□□□□ 0.7
NBPF4Q96M43 EIF1AD-211ENST00000533544 965 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
NBPF4Q96M43 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
NBPF4Q96M43 PGAM1P5-201ENST00000548011 764 ntBASIC19.41■□□□□ 0.7
NBPF4Q96M43 AC010531.4-203ENST00000561709 660 ntTSL 3 BASIC19.41■□□□□ 0.7
NBPF4Q96M43 AC009560.1-201ENST00000620208 434 ntBASIC19.41■□□□□ 0.7
NBPF4Q96M43 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
NBPF4Q96M43 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
NBPF4Q96M43 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC19.41■□□□□ 0.7
NBPF4Q96M43 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC19.41■□□□□ 0.7
NBPF4Q96M43 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
NBPF4Q96M43 UPK3BL1-201ENST00000340457 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NBPF4Q96M43 AHCYP4-201ENST00000419201 1315 ntBASIC19.41■□□□□ 0.7
NBPF4Q96M43 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC19.41■□□□□ 0.7
NBPF4Q96M43 AC092135.3-201ENST00000624151 1846 ntBASIC19.41■□□□□ 0.7
NBPF4Q96M43 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
NBPF4Q96M43 AC139712.1-201ENST00000378256 1875 ntBASIC19.41■□□□□ 0.7
NBPF4Q96M43 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
NBPF4Q96M43 KRT8P31-201ENST00000504812 1408 ntBASIC19.41■□□□□ 0.7
NBPF4Q96M43 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
NBPF4Q96M43 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NBPF4Q96M43 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NBPF4Q96M43 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NBPF4Q96M43 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NBPF4Q96M43 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC19.41■□□□□ 0.7
NBPF4Q96M43 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NBPF4Q96M43 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC19.41■□□□□ 0.7
NBPF4Q96M43 LINC01229-201ENST00000561510 1494 ntTSL 5 BASIC19.41■□□□□ 0.7
NBPF4Q96M43 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NBPF4Q96M43 AC046158.3-201ENST00000624947 2558 ntBASIC19.4■□□□□ 0.7
NBPF4Q96M43 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC19.4■□□□□ 0.7
NBPF4Q96M43 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
NBPF4Q96M43 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC19.4■□□□□ 0.7
NBPF4Q96M43 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NBPF4Q96M43 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NBPF4Q96M43 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NBPF4Q96M43 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
NBPF4Q96M43 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
NBPF4Q96M43 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NBPF4Q96M43 GSTP1-201ENST00000398603 700 ntTSL 3 BASIC19.4■□□□□ 0.7
NBPF4Q96M43 PCBP3-201ENST00000400304 1086 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
NBPF4Q96M43 AL118508.1-202ENST00000411595 709 ntTSL 2 BASIC19.4■□□□□ 0.7
NBPF4Q96M43 PCBP3-208ENST00000449640 1278 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
NBPF4Q96M43 RN7SL8P-201ENST00000461771 266 ntBASIC19.4■□□□□ 0.7
NBPF4Q96M43 AL049795.2-201ENST00000515055 667 ntTSL 2 BASIC19.4■□□□□ 0.7
NBPF4Q96M43 AC246817.2-203ENST00000517357 569 ntTSL 4 BASIC19.4■□□□□ 0.7
NBPF4Q96M43 AC246817.2-202ENST00000519393 564 ntTSL 4 BASIC19.4■□□□□ 0.7
NBPF4Q96M43 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC19.4■□□□□ 0.7
NBPF4Q96M43 TMEM231-206ENST00000565067 1078 ntTSL 5 BASIC19.4■□□□□ 0.7
NBPF4Q96M43 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC19.4■□□□□ 0.7
NBPF4Q96M43 AC093330.1-206ENST00000582546 812 ntTSL 3 BASIC19.4■□□□□ 0.7
NBPF4Q96M43 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NBPF4Q96M43 CMC2-224ENST00000630396 481 ntTSL 5 BASIC19.4■□□□□ 0.7
NBPF4Q96M43 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
NBPF4Q96M43 AGK-211ENST00000629555 2765 ntTSL 5 BASIC19.4■□□□□ 0.7
NBPF4Q96M43 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC19.4■□□□□ 0.7
NBPF4Q96M43 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
NBPF4Q96M43 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
NBPF4Q96M43 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC19.4■□□□□ 0.7
NBPF4Q96M43 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.7
NBPF4Q96M43 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.7
NBPF4Q96M43 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC19.39■□□□□ 0.7
NBPF4Q96M43 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 62 ms