Protein–RNA interactions for Protein: Q96DX8

RTP4, Receptor-transporting protein 4, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP4Q96DX8 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC15.21■□□□□ 0.03
RTP4Q96DX8 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC15.21■□□□□ 0.03
RTP4Q96DX8 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RTP4Q96DX8 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
RTP4Q96DX8 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
RTP4Q96DX8 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
RTP4Q96DX8 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC15.21■□□□□ 0.03
RTP4Q96DX8 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
RTP4Q96DX8 HLA-V-201ENST00000429037 534 ntBASIC15.21■□□□□ 0.03
RTP4Q96DX8 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC15.21■□□□□ 0.03
RTP4Q96DX8 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
RTP4Q96DX8 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC15.21■□□□□ 0.03
RTP4Q96DX8 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC15.21■□□□□ 0.03
RTP4Q96DX8 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC15.21■□□□□ 0.03
RTP4Q96DX8 RN7SL48P-201ENST00000579283 293 ntBASIC15.21■□□□□ 0.03
RTP4Q96DX8 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC15.21■□□□□ 0.03
RTP4Q96DX8 AL033527.5-201ENST00000641382 801 ntBASIC15.21■□□□□ 0.03
RTP4Q96DX8 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
RTP4Q96DX8 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RTP4Q96DX8 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RTP4Q96DX8 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
RTP4Q96DX8 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
RTP4Q96DX8 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
RTP4Q96DX8 AL138709.1-201ENST00000614840 1693 ntBASIC15.21■□□□□ 0.03
RTP4Q96DX8 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC15.21■□□□□ 0.03
RTP4Q96DX8 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.03
RTP4Q96DX8 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
RTP4Q96DX8 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
RTP4Q96DX8 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RTP4Q96DX8 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC15.21■□□□□ 0.02
RTP4Q96DX8 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC15.21■□□□□ 0.02
RTP4Q96DX8 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
RTP4Q96DX8 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC15.21■□□□□ 0.02
RTP4Q96DX8 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC15.21■□□□□ 0.02
RTP4Q96DX8 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC15.21■□□□□ 0.02
RTP4Q96DX8 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
RTP4Q96DX8 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
RTP4Q96DX8 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
RTP4Q96DX8 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RTP4Q96DX8 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
RTP4Q96DX8 AC215219.1-201ENST00000400706 1817 ntBASIC15.2■□□□□ 0.02
RTP4Q96DX8 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RTP4Q96DX8 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC15.2■□□□□ 0.02
RTP4Q96DX8 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RTP4Q96DX8 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RTP4Q96DX8 AC117489.1-201ENST00000625169 3217 ntBASIC15.2■□□□□ 0.02
RTP4Q96DX8 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC15.2■□□□□ 0.02
RTP4Q96DX8 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
RTP4Q96DX8 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC15.2■□□□□ 0.02
RTP4Q96DX8 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RTP4Q96DX8 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RTP4Q96DX8 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
RTP4Q96DX8 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RTP4Q96DX8 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RTP4Q96DX8 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC15.2■□□□□ 0.02
RTP4Q96DX8 ACTG1P3-201ENST00000431775 1114 ntBASIC15.2■□□□□ 0.02
RTP4Q96DX8 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC15.2■□□□□ 0.02
RTP4Q96DX8 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC15.2■□□□□ 0.02
RTP4Q96DX8 RAB43P1-201ENST00000561790 589 ntBASIC15.2■□□□□ 0.02
RTP4Q96DX8 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC15.2■□□□□ 0.02
RTP4Q96DX8 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC15.2■□□□□ 0.02
RTP4Q96DX8 APOC4-201ENST00000591600 348 ntTSL 3 BASIC15.2■□□□□ 0.02
RTP4Q96DX8 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
RTP4Q96DX8 AC138466.3-201ENST00000619983 221 ntBASIC15.2■□□□□ 0.02
RTP4Q96DX8 ENPP7P14-201ENST00000621765 1040 ntBASIC15.2■□□□□ 0.02
RTP4Q96DX8 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
RTP4Q96DX8 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RTP4Q96DX8 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RTP4Q96DX8 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC15.2■□□□□ 0.02
RTP4Q96DX8 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RTP4Q96DX8 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RTP4Q96DX8 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC15.2■□□□□ 0.02
RTP4Q96DX8 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
RTP4Q96DX8 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RTP4Q96DX8 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RTP4Q96DX8 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
RTP4Q96DX8 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC15.2■□□□□ 0.02
RTP4Q96DX8 AC011474.4-201ENST00000623523 2076 ntBASIC15.2■□□□□ 0.02
RTP4Q96DX8 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RTP4Q96DX8 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
RTP4Q96DX8 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC15.19■□□□□ 0.02
RTP4Q96DX8 AL590440.2-201ENST00000641973 1595 ntBASIC15.19■□□□□ 0.02
RTP4Q96DX8 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC15.19■□□□□ 0.02
RTP4Q96DX8 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
RTP4Q96DX8 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
RTP4Q96DX8 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
RTP4Q96DX8 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
RTP4Q96DX8 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RTP4Q96DX8 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
RTP4Q96DX8 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
RTP4Q96DX8 GSN-209ENST00000449733 2702 ntTSL 2 BASIC15.19■□□□□ 0.02
RTP4Q96DX8 R3HDM2P2-201ENST00000401880 2116 ntBASIC15.19■□□□□ 0.02
RTP4Q96DX8 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
RTP4Q96DX8 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RTP4Q96DX8 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
RTP4Q96DX8 AC139712.1-201ENST00000378256 1875 ntBASIC15.19■□□□□ 0.02
RTP4Q96DX8 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RTP4Q96DX8 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
RTP4Q96DX8 AC012617.1-204ENST00000586340 2305 ntBASIC15.19■□□□□ 0.02
RTP4Q96DX8 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC15.19■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 76.6 ms