Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC14.21□□□□□ -0.14
TM9SF4Q92544 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
TM9SF4Q92544 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.14
TM9SF4Q92544 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC14.21□□□□□ -0.14
TM9SF4Q92544 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC14.21□□□□□ -0.14
TM9SF4Q92544 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.14
TM9SF4Q92544 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
TM9SF4Q92544 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC14.2□□□□□ -0.14
TM9SF4Q92544 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TM9SF4Q92544 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TM9SF4Q92544 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC14.2□□□□□ -0.14
TM9SF4Q92544 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
TM9SF4Q92544 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC14.2□□□□□ -0.14
TM9SF4Q92544 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
TM9SF4Q92544 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
TM9SF4Q92544 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
TM9SF4Q92544 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TM9SF4Q92544 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
TM9SF4Q92544 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
TM9SF4Q92544 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
TM9SF4Q92544 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC14.2□□□□□ -0.14
TM9SF4Q92544 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC14.2□□□□□ -0.14
TM9SF4Q92544 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
TM9SF4Q92544 RPS3-201ENST00000278572 907 ntTSL 3 BASIC14.2□□□□□ -0.14
TM9SF4Q92544 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TM9SF4Q92544 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
TM9SF4Q92544 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TM9SF4Q92544 MIR1247-201ENST00000408206 136 ntBASIC14.2□□□□□ -0.14
TM9SF4Q92544 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC14.2□□□□□ -0.14
TM9SF4Q92544 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC14.2□□□□□ -0.14
TM9SF4Q92544 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
TM9SF4Q92544 FAM86HP-204ENST00000513466 959 ntBASIC14.2□□□□□ -0.14
TM9SF4Q92544 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC14.2□□□□□ -0.14
TM9SF4Q92544 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC14.2□□□□□ -0.14
TM9SF4Q92544 NAT9-222ENST00000583476 583 ntTSL 3 BASIC14.2□□□□□ -0.14
TM9SF4Q92544 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC14.2□□□□□ -0.14
TM9SF4Q92544 FOS-202ENST00000535987 1402 ntTSL 2 BASIC14.2□□□□□ -0.14
TM9SF4Q92544 FLII-221ENST00000578558 2377 ntTSL 5 BASIC14.2□□□□□ -0.14
TM9SF4Q92544 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
TM9SF4Q92544 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
TM9SF4Q92544 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC14.2□□□□□ -0.14
TM9SF4Q92544 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
TM9SF4Q92544 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC14.2□□□□□ -0.14
TM9SF4Q92544 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
TM9SF4Q92544 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TM9SF4Q92544 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
TM9SF4Q92544 AC127383.1-201ENST00000444697 1800 ntBASIC14.2□□□□□ -0.14
TM9SF4Q92544 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
TM9SF4Q92544 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC14.2□□□□□ -0.14
TM9SF4Q92544 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC14.2□□□□□ -0.14
TM9SF4Q92544 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TM9SF4Q92544 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
TM9SF4Q92544 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC14.19□□□□□ -0.14
TM9SF4Q92544 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC14.19□□□□□ -0.14
TM9SF4Q92544 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
TM9SF4Q92544 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC14.19□□□□□ -0.14
TM9SF4Q92544 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TM9SF4Q92544 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC14.19□□□□□ -0.14
TM9SF4Q92544 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TM9SF4Q92544 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC14.19□□□□□ -0.14
TM9SF4Q92544 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC14.19□□□□□ -0.14
TM9SF4Q92544 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TM9SF4Q92544 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TM9SF4Q92544 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
TM9SF4Q92544 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC14.19□□□□□ -0.14
TM9SF4Q92544 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
TM9SF4Q92544 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TM9SF4Q92544 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
TM9SF4Q92544 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC14.19□□□□□ -0.14
TM9SF4Q92544 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC14.19□□□□□ -0.14
TM9SF4Q92544 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC14.19□□□□□ -0.14
TM9SF4Q92544 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TM9SF4Q92544 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TM9SF4Q92544 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TM9SF4Q92544 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
TM9SF4Q92544 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC14.19□□□□□ -0.14
TM9SF4Q92544 OLR1-203ENST00000432556 950 ntTSL 2 BASIC14.19□□□□□ -0.14
TM9SF4Q92544 FAM197Y7-201ENST00000432892 766 ntBASIC14.19□□□□□ -0.14
TM9SF4Q92544 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
TM9SF4Q92544 GAPDHP40-201ENST00000505218 1006 ntBASIC14.19□□□□□ -0.14
TM9SF4Q92544 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC14.19□□□□□ -0.14
TM9SF4Q92544 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC14.19□□□□□ -0.14
TM9SF4Q92544 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
TM9SF4Q92544 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TM9SF4Q92544 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TM9SF4Q92544 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC14.19□□□□□ -0.14
TM9SF4Q92544 TBCB-211ENST00000589996 724 ntTSL 3 BASIC14.19□□□□□ -0.14
TM9SF4Q92544 UBL5-208ENST00000593087 320 ntTSL 3 BASIC14.19□□□□□ -0.14
TM9SF4Q92544 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
TM9SF4Q92544 TK2-221ENST00000620035 5060 ntTSL 2 BASIC14.19□□□□□ -0.14
TM9SF4Q92544 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
TM9SF4Q92544 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TM9SF4Q92544 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TM9SF4Q92544 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
TM9SF4Q92544 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TM9SF4Q92544 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC14.19□□□□□ -0.14
TM9SF4Q92544 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TM9SF4Q92544 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TM9SF4Q92544 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TM9SF4Q92544 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms