Protein–RNA interactions for Protein: Q8TBE3

FNDC9, Fibronectin type III domain-containing protein 9, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC9Q8TBE3 MIR1202-201ENST00000408529 83 ntBASIC13.53□□□□□ -0.24
FNDC9Q8TBE3 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC13.53□□□□□ -0.24
FNDC9Q8TBE3 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC13.53□□□□□ -0.24
FNDC9Q8TBE3 AC023310.1-201ENST00000554836 735 ntBASIC13.53□□□□□ -0.24
FNDC9Q8TBE3 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC13.53□□□□□ -0.24
FNDC9Q8TBE3 SERF2-217ENST00000630046 862 ntTSL 5 BASIC13.53□□□□□ -0.24
FNDC9Q8TBE3 AL603764.1-201ENST00000636452 321 ntBASIC13.53□□□□□ -0.24
FNDC9Q8TBE3 AC006453.4-201ENST00000636949 1252 ntBASIC13.53□□□□□ -0.24
FNDC9Q8TBE3 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
FNDC9Q8TBE3 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
FNDC9Q8TBE3 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC13.53□□□□□ -0.24
FNDC9Q8TBE3 AHCYP2-201ENST00000430630 1300 ntBASIC13.53□□□□□ -0.24
FNDC9Q8TBE3 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
FNDC9Q8TBE3 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC13.53□□□□□ -0.24
FNDC9Q8TBE3 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
FNDC9Q8TBE3 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC13.53□□□□□ -0.24
FNDC9Q8TBE3 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC13.53□□□□□ -0.24
FNDC9Q8TBE3 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
FNDC9Q8TBE3 AL354989.2-201ENST00000435838 1540 ntBASIC13.53□□□□□ -0.24
FNDC9Q8TBE3 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
FNDC9Q8TBE3 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
FNDC9Q8TBE3 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
FNDC9Q8TBE3 MROH4P-201ENST00000431302 1578 ntBASIC13.53□□□□□ -0.24
FNDC9Q8TBE3 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC13.53□□□□□ -0.24
FNDC9Q8TBE3 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
FNDC9Q8TBE3 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
FNDC9Q8TBE3 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
FNDC9Q8TBE3 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
FNDC9Q8TBE3 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC13.53□□□□□ -0.24
FNDC9Q8TBE3 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC13.53□□□□□ -0.24
FNDC9Q8TBE3 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.24
FNDC9Q8TBE3 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
FNDC9Q8TBE3 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
FNDC9Q8TBE3 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
FNDC9Q8TBE3 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC13.52□□□□□ -0.24
FNDC9Q8TBE3 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
FNDC9Q8TBE3 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
FNDC9Q8TBE3 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
FNDC9Q8TBE3 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
FNDC9Q8TBE3 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
FNDC9Q8TBE3 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
FNDC9Q8TBE3 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
FNDC9Q8TBE3 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.24
FNDC9Q8TBE3 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
FNDC9Q8TBE3 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
FNDC9Q8TBE3 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC13.52□□□□□ -0.25
FNDC9Q8TBE3 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
FNDC9Q8TBE3 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
FNDC9Q8TBE3 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
FNDC9Q8TBE3 TPO-206ENST00000382269 1155 ntTSL 5 BASIC13.52□□□□□ -0.25
FNDC9Q8TBE3 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
FNDC9Q8TBE3 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
FNDC9Q8TBE3 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC13.52□□□□□ -0.25
FNDC9Q8TBE3 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC13.52□□□□□ -0.25
FNDC9Q8TBE3 RNA5SP412-201ENST00000516234 123 ntBASIC13.52□□□□□ -0.25
FNDC9Q8TBE3 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC13.52□□□□□ -0.25
FNDC9Q8TBE3 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
FNDC9Q8TBE3 AL583810.1-201ENST00000553344 1045 ntBASIC13.52□□□□□ -0.25
FNDC9Q8TBE3 DUX4L47-201ENST00000566374 394 ntBASIC13.52□□□□□ -0.25
FNDC9Q8TBE3 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC13.52□□□□□ -0.25
FNDC9Q8TBE3 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC13.52□□□□□ -0.25
FNDC9Q8TBE3 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
FNDC9Q8TBE3 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
FNDC9Q8TBE3 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
FNDC9Q8TBE3 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
FNDC9Q8TBE3 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
FNDC9Q8TBE3 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
FNDC9Q8TBE3 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
FNDC9Q8TBE3 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
FNDC9Q8TBE3 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC13.52□□□□□ -0.25
FNDC9Q8TBE3 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
FNDC9Q8TBE3 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC13.52□□□□□ -0.25
FNDC9Q8TBE3 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
FNDC9Q8TBE3 REXO1L2P-201ENST00000425429 2069 ntBASIC13.52□□□□□ -0.25
FNDC9Q8TBE3 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
FNDC9Q8TBE3 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
FNDC9Q8TBE3 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
FNDC9Q8TBE3 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC13.52□□□□□ -0.25
FNDC9Q8TBE3 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
FNDC9Q8TBE3 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC13.52□□□□□ -0.25
FNDC9Q8TBE3 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
FNDC9Q8TBE3 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC13.52□□□□□ -0.25
FNDC9Q8TBE3 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
FNDC9Q8TBE3 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
FNDC9Q8TBE3 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
FNDC9Q8TBE3 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
FNDC9Q8TBE3 ST20-AS1-201ENST00000560255 4223 ntBASIC13.51□□□□□ -0.25
FNDC9Q8TBE3 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
FNDC9Q8TBE3 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
FNDC9Q8TBE3 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
FNDC9Q8TBE3 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
FNDC9Q8TBE3 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC13.51□□□□□ -0.25
FNDC9Q8TBE3 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
FNDC9Q8TBE3 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
FNDC9Q8TBE3 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
FNDC9Q8TBE3 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
FNDC9Q8TBE3 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
FNDC9Q8TBE3 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
FNDC9Q8TBE3 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC13.51□□□□□ -0.25
FNDC9Q8TBE3 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms