Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
TTC9CQ8N5M4 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
TTC9CQ8N5M4 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
TTC9CQ8N5M4 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
TTC9CQ8N5M4 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
TTC9CQ8N5M4 USE1-206ENST00000595101 1776 ntTSL 2 BASIC11.88□□□□□ -0.51
TTC9CQ8N5M4 AC055811.4-201ENST00000624039 1754 ntBASIC11.88□□□□□ -0.51
TTC9CQ8N5M4 PTENP1-202ENST00000532280 3996 ntBASIC11.88□□□□□ -0.51
TTC9CQ8N5M4 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC11.88□□□□□ -0.51
TTC9CQ8N5M4 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
TTC9CQ8N5M4 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
TTC9CQ8N5M4 MPI-203ENST00000535694 1523 ntTSL 2 BASIC11.88□□□□□ -0.51
TTC9CQ8N5M4 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC11.88□□□□□ -0.51
TTC9CQ8N5M4 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
TTC9CQ8N5M4 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
TTC9CQ8N5M4 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
TTC9CQ8N5M4 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC11.88□□□□□ -0.51
TTC9CQ8N5M4 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC11.88□□□□□ -0.51
TTC9CQ8N5M4 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
TTC9CQ8N5M4 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
TTC9CQ8N5M4 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC11.88□□□□□ -0.51
TTC9CQ8N5M4 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC11.88□□□□□ -0.51
TTC9CQ8N5M4 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
TTC9CQ8N5M4 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
TTC9CQ8N5M4 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC11.88□□□□□ -0.51
TTC9CQ8N5M4 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC11.88□□□□□ -0.51
TTC9CQ8N5M4 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC11.88□□□□□ -0.51
TTC9CQ8N5M4 WASH4P-201ENST00000564273 1246 ntBASIC11.88□□□□□ -0.51
TTC9CQ8N5M4 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC11.88□□□□□ -0.51
TTC9CQ8N5M4 AC027307.3-201ENST00000594262 1100 ntBASIC11.88□□□□□ -0.51
TTC9CQ8N5M4 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
TTC9CQ8N5M4 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
TTC9CQ8N5M4 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
TTC9CQ8N5M4 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
TTC9CQ8N5M4 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
TTC9CQ8N5M4 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
TTC9CQ8N5M4 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
TTC9CQ8N5M4 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
TTC9CQ8N5M4 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC11.88□□□□□ -0.51
TTC9CQ8N5M4 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
TTC9CQ8N5M4 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
TTC9CQ8N5M4 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC11.88□□□□□ -0.51
TTC9CQ8N5M4 SNX18-202ENST00000343017 3140 ntBASIC11.88□□□□□ -0.51
TTC9CQ8N5M4 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
TTC9CQ8N5M4 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC11.88□□□□□ -0.51
TTC9CQ8N5M4 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
TTC9CQ8N5M4 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC11.88□□□□□ -0.51
TTC9CQ8N5M4 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC11.88□□□□□ -0.51
TTC9CQ8N5M4 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
TTC9CQ8N5M4 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
TTC9CQ8N5M4 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
TTC9CQ8N5M4 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC11.87□□□□□ -0.51
TTC9CQ8N5M4 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
TTC9CQ8N5M4 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
TTC9CQ8N5M4 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC11.87□□□□□ -0.51
TTC9CQ8N5M4 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
TTC9CQ8N5M4 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
TTC9CQ8N5M4 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
TTC9CQ8N5M4 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
TTC9CQ8N5M4 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
TTC9CQ8N5M4 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC11.87□□□□□ -0.51
TTC9CQ8N5M4 CNTNAP3P2-201ENST00000617175 3861 ntBASIC11.87□□□□□ -0.51
TTC9CQ8N5M4 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC11.87□□□□□ -0.51
TTC9CQ8N5M4 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC11.87□□□□□ -0.51
TTC9CQ8N5M4 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
TTC9CQ8N5M4 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
TTC9CQ8N5M4 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
TTC9CQ8N5M4 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
TTC9CQ8N5M4 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
TTC9CQ8N5M4 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
TTC9CQ8N5M4 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC11.87□□□□□ -0.51
TTC9CQ8N5M4 AC098614.1-201ENST00000368528 745 ntBASIC11.87□□□□□ -0.51
TTC9CQ8N5M4 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC11.87□□□□□ -0.51
TTC9CQ8N5M4 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC11.87□□□□□ -0.51
TTC9CQ8N5M4 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC11.87□□□□□ -0.51
TTC9CQ8N5M4 ACTG1P3-201ENST00000431775 1114 ntBASIC11.87□□□□□ -0.51
TTC9CQ8N5M4 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC11.87□□□□□ -0.51
TTC9CQ8N5M4 EIF3FP3-201ENST00000434851 1086 ntBASIC11.87□□□□□ -0.51
TTC9CQ8N5M4 HMGN1P19-201ENST00000436976 333 ntBASIC11.87□□□□□ -0.51
TTC9CQ8N5M4 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC11.87□□□□□ -0.51
TTC9CQ8N5M4 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
TTC9CQ8N5M4 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC11.87□□□□□ -0.51
TTC9CQ8N5M4 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC11.87□□□□□ -0.51
TTC9CQ8N5M4 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
TTC9CQ8N5M4 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC11.87□□□□□ -0.51
TTC9CQ8N5M4 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC11.87□□□□□ -0.51
TTC9CQ8N5M4 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC11.87□□□□□ -0.51
TTC9CQ8N5M4 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
TTC9CQ8N5M4 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
TTC9CQ8N5M4 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
TTC9CQ8N5M4 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
TTC9CQ8N5M4 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC11.87□□□□□ -0.51
TTC9CQ8N5M4 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC11.87□□□□□ -0.51
TTC9CQ8N5M4 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
TTC9CQ8N5M4 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC11.87□□□□□ -0.51
TTC9CQ8N5M4 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
TTC9CQ8N5M4 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
TTC9CQ8N5M4 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC11.87□□□□□ -0.51
TTC9CQ8N5M4 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
TTC9CQ8N5M4 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms