Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC16.29■□□□□ 0.2
VPS52Q8N1B4 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC16.29■□□□□ 0.2
VPS52Q8N1B4 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC16.29■□□□□ 0.2
VPS52Q8N1B4 NKG7-204ENST00000595217 816 ntTSL 2 BASIC16.29■□□□□ 0.2
VPS52Q8N1B4 AC106872.11-201ENST00000605838 421 ntBASIC16.29■□□□□ 0.2
VPS52Q8N1B4 AL451050.2-201ENST00000606967 682 ntBASIC16.29■□□□□ 0.2
VPS52Q8N1B4 AC244157.2-201ENST00000616239 1006 ntBASIC16.29■□□□□ 0.2
VPS52Q8N1B4 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
VPS52Q8N1B4 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
VPS52Q8N1B4 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
VPS52Q8N1B4 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
VPS52Q8N1B4 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
VPS52Q8N1B4 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
VPS52Q8N1B4 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC16.29■□□□□ 0.2
VPS52Q8N1B4 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
VPS52Q8N1B4 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC16.29■□□□□ 0.2
VPS52Q8N1B4 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
VPS52Q8N1B4 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC16.29■□□□□ 0.2
VPS52Q8N1B4 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
VPS52Q8N1B4 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC16.29■□□□□ 0.2
VPS52Q8N1B4 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
VPS52Q8N1B4 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
VPS52Q8N1B4 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC16.28■□□□□ 0.2
VPS52Q8N1B4 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
VPS52Q8N1B4 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
VPS52Q8N1B4 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC16.28■□□□□ 0.2
VPS52Q8N1B4 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
VPS52Q8N1B4 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC16.28■□□□□ 0.2
VPS52Q8N1B4 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
VPS52Q8N1B4 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC16.28■□□□□ 0.2
VPS52Q8N1B4 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
VPS52Q8N1B4 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
VPS52Q8N1B4 AC092506.1-202ENST00000401022 528 ntBASIC16.28■□□□□ 0.2
VPS52Q8N1B4 LSM5-207ENST00000410044 687 ntTSL 3 BASIC16.28■□□□□ 0.2
VPS52Q8N1B4 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC16.28■□□□□ 0.2
VPS52Q8N1B4 EIF3FP3-201ENST00000434851 1086 ntBASIC16.28■□□□□ 0.2
VPS52Q8N1B4 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC16.28■□□□□ 0.2
VPS52Q8N1B4 REEP1-202ENST00000453231 940 ntTSL 2 BASIC16.28■□□□□ 0.2
VPS52Q8N1B4 HIST2H2BC-201ENST00000498492 580 ntBASIC16.28■□□□□ 0.2
VPS52Q8N1B4 AC126915.1-201ENST00000522847 1038 ntBASIC16.28■□□□□ 0.2
VPS52Q8N1B4 RNF41-210ENST00000552244 716 ntTSL 3 BASIC16.28■□□□□ 0.2
VPS52Q8N1B4 PPY2P-201ENST00000582808 702 ntBASIC16.28■□□□□ 0.2
VPS52Q8N1B4 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
VPS52Q8N1B4 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC16.28■□□□□ 0.2
VPS52Q8N1B4 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC16.28■□□□□ 0.2
VPS52Q8N1B4 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC16.28■□□□□ 0.2
VPS52Q8N1B4 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC16.28■□□□□ 0.2
VPS52Q8N1B4 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC16.28■□□□□ 0.2
VPS52Q8N1B4 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
VPS52Q8N1B4 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
VPS52Q8N1B4 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
VPS52Q8N1B4 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC16.28■□□□□ 0.2
VPS52Q8N1B4 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
VPS52Q8N1B4 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
VPS52Q8N1B4 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
VPS52Q8N1B4 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
VPS52Q8N1B4 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
VPS52Q8N1B4 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
VPS52Q8N1B4 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
VPS52Q8N1B4 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
VPS52Q8N1B4 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
VPS52Q8N1B4 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
VPS52Q8N1B4 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC16.27■□□□□ 0.2
VPS52Q8N1B4 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
VPS52Q8N1B4 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
VPS52Q8N1B4 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC16.27■□□□□ 0.2
VPS52Q8N1B4 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
VPS52Q8N1B4 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
VPS52Q8N1B4 PGR-210ENST00000619228 3038 ntTSL 5 BASIC16.27■□□□□ 0.2
VPS52Q8N1B4 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
VPS52Q8N1B4 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC16.27■□□□□ 0.2
VPS52Q8N1B4 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
VPS52Q8N1B4 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
VPS52Q8N1B4 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
VPS52Q8N1B4 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC16.27■□□□□ 0.2
VPS52Q8N1B4 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
VPS52Q8N1B4 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
VPS52Q8N1B4 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
VPS52Q8N1B4 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC16.27■□□□□ 0.2
VPS52Q8N1B4 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC16.27■□□□□ 0.2
VPS52Q8N1B4 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
VPS52Q8N1B4 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
VPS52Q8N1B4 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC16.27■□□□□ 0.2
VPS52Q8N1B4 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC16.27■□□□□ 0.2
VPS52Q8N1B4 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC16.27■□□□□ 0.2
VPS52Q8N1B4 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC16.27■□□□□ 0.2
VPS52Q8N1B4 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC16.27■□□□□ 0.2
VPS52Q8N1B4 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC16.27■□□□□ 0.2
VPS52Q8N1B4 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
VPS52Q8N1B4 OR10B1P-201ENST00000601666 907 ntBASIC16.27■□□□□ 0.2
VPS52Q8N1B4 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC16.27■□□□□ 0.2
VPS52Q8N1B4 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
VPS52Q8N1B4 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
VPS52Q8N1B4 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
VPS52Q8N1B4 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC16.27■□□□□ 0.2
VPS52Q8N1B4 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.2
VPS52Q8N1B4 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
VPS52Q8N1B4 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
VPS52Q8N1B4 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
VPS52Q8N1B4 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 65.4 ms