Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
LRRTM1Q86UE6 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
LRRTM1Q86UE6 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
LRRTM1Q86UE6 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
LRRTM1Q86UE6 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
LRRTM1Q86UE6 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
LRRTM1Q86UE6 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
LRRTM1Q86UE6 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
LRRTM1Q86UE6 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
LRRTM1Q86UE6 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
LRRTM1Q86UE6 CENPM-205ENST00000404067 905 ntTSL 3 BASIC13.04□□□□□ -0.32
LRRTM1Q86UE6 CENPM-206ENST00000407253 818 ntTSL 2 BASIC13.04□□□□□ -0.32
LRRTM1Q86UE6 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC13.04□□□□□ -0.32
LRRTM1Q86UE6 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC13.04□□□□□ -0.32
LRRTM1Q86UE6 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC13.04□□□□□ -0.32
LRRTM1Q86UE6 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC13.04□□□□□ -0.32
LRRTM1Q86UE6 RN7SL618P-201ENST00000477850 296 ntBASIC13.04□□□□□ -0.32
LRRTM1Q86UE6 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC13.04□□□□□ -0.32
LRRTM1Q86UE6 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC13.04□□□□□ -0.32
LRRTM1Q86UE6 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC13.04□□□□□ -0.32
LRRTM1Q86UE6 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC13.04□□□□□ -0.32
LRRTM1Q86UE6 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
LRRTM1Q86UE6 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
LRRTM1Q86UE6 CICP16-201ENST00000502609 2813 ntBASIC13.04□□□□□ -0.32
LRRTM1Q86UE6 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
LRRTM1Q86UE6 TUBB3P1-201ENST00000405796 1332 ntBASIC13.04□□□□□ -0.32
LRRTM1Q86UE6 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
LRRTM1Q86UE6 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
LRRTM1Q86UE6 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC13.04□□□□□ -0.32
LRRTM1Q86UE6 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC13.04□□□□□ -0.32
LRRTM1Q86UE6 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
LRRTM1Q86UE6 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
LRRTM1Q86UE6 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
LRRTM1Q86UE6 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC13.04□□□□□ -0.32
LRRTM1Q86UE6 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
LRRTM1Q86UE6 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
LRRTM1Q86UE6 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
LRRTM1Q86UE6 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
LRRTM1Q86UE6 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
LRRTM1Q86UE6 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
LRRTM1Q86UE6 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC13.04□□□□□ -0.32
LRRTM1Q86UE6 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
LRRTM1Q86UE6 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
LRRTM1Q86UE6 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
LRRTM1Q86UE6 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC13.03□□□□□ -0.32
LRRTM1Q86UE6 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC13.03□□□□□ -0.32
LRRTM1Q86UE6 TCAM1P-207ENST00000485295 1537 ntBASIC13.03□□□□□ -0.32
LRRTM1Q86UE6 DGCR9-201ENST00000609630 2415 ntBASIC13.03□□□□□ -0.32
LRRTM1Q86UE6 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
LRRTM1Q86UE6 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
LRRTM1Q86UE6 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
LRRTM1Q86UE6 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
LRRTM1Q86UE6 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
LRRTM1Q86UE6 AL158070.2-201ENST00000623713 1621 ntBASIC13.03□□□□□ -0.32
LRRTM1Q86UE6 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
LRRTM1Q86UE6 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
LRRTM1Q86UE6 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC13.03□□□□□ -0.32
LRRTM1Q86UE6 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
LRRTM1Q86UE6 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
LRRTM1Q86UE6 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
LRRTM1Q86UE6 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
LRRTM1Q86UE6 WLS-201ENST00000262348 2748 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
LRRTM1Q86UE6 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
LRRTM1Q86UE6 MIR574-201ENST00000385209 96 ntBASIC13.03□□□□□ -0.32
LRRTM1Q86UE6 SUN1-204ENST00000403868 978 ntTSL 2 BASIC13.03□□□□□ -0.32
LRRTM1Q86UE6 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC13.03□□□□□ -0.32
LRRTM1Q86UE6 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
LRRTM1Q86UE6 AC023141.5-201ENST00000458585 616 ntBASIC13.03□□□□□ -0.32
LRRTM1Q86UE6 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
LRRTM1Q86UE6 AL512356.2-201ENST00000546955 174 ntBASIC13.03□□□□□ -0.32
LRRTM1Q86UE6 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
LRRTM1Q86UE6 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC13.03□□□□□ -0.32
LRRTM1Q86UE6 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
LRRTM1Q86UE6 SPDYE12P-201ENST00000618416 771 ntBASIC13.03□□□□□ -0.32
LRRTM1Q86UE6 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
LRRTM1Q86UE6 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC13.03□□□□□ -0.32
LRRTM1Q86UE6 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
LRRTM1Q86UE6 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
LRRTM1Q86UE6 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
LRRTM1Q86UE6 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC13.03□□□□□ -0.32
LRRTM1Q86UE6 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
LRRTM1Q86UE6 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC13.03□□□□□ -0.32
LRRTM1Q86UE6 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
LRRTM1Q86UE6 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
LRRTM1Q86UE6 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC13.03□□□□□ -0.32
LRRTM1Q86UE6 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC13.03□□□□□ -0.32
LRRTM1Q86UE6 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
LRRTM1Q86UE6 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
LRRTM1Q86UE6 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
LRRTM1Q86UE6 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC13.03□□□□□ -0.32
LRRTM1Q86UE6 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC13.03□□□□□ -0.32
LRRTM1Q86UE6 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
LRRTM1Q86UE6 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
LRRTM1Q86UE6 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC13.03□□□□□ -0.32
LRRTM1Q86UE6 EHMT2-201ENST00000375528 4047 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
LRRTM1Q86UE6 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
LRRTM1Q86UE6 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC13.02□□□□□ -0.32
LRRTM1Q86UE6 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
LRRTM1Q86UE6 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
LRRTM1Q86UE6 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms