Protein–RNA interactions for Protein: Q86UE3

ZNF546, Zinc finger protein 546, humanhuman

Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF546Q86UE3 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
ZNF546Q86UE3 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC12.51□□□□□ -0.41
ZNF546Q86UE3 LDHAL6A-201ENST00000280706 2526 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
ZNF546Q86UE3 SPATA20-227ENST00000634597 2587 ntAPPRIS ALT1 TSL 5 BASIC12.51□□□□□ -0.41
ZNF546Q86UE3 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC12.51□□□□□ -0.41
ZNF546Q86UE3 FUT8-202ENST00000358307 2664 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
ZNF546Q86UE3 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC12.51□□□□□ -0.41
ZNF546Q86UE3 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
ZNF546Q86UE3 DCAF10-202ENST00000377724 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
ZNF546Q86UE3 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
ZNF546Q86UE3 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
ZNF546Q86UE3 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
ZNF546Q86UE3 SLC4A5-201ENST00000346834 6233 ntAPPRIS P4 TSL 5 BASIC12.51□□□□□ -0.41
ZNF546Q86UE3 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
ZNF546Q86UE3 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
ZNF546Q86UE3 AC004846.1-201ENST00000554614 3050 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
ZNF546Q86UE3 PTK2-202ENST00000395218 4415 ntTSL 5 BASIC12.51□□□□□ -0.41
ZNF546Q86UE3 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
ZNF546Q86UE3 LINC00324-201ENST00000315707 2082 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
ZNF546Q86UE3 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC12.5□□□□□ -0.41
ZNF546Q86UE3 COLGALT1-201ENST00000252599 3704 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
ZNF546Q86UE3 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
ZNF546Q86UE3 HIPK3-202ENST00000379016 7345 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
ZNF546Q86UE3 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
ZNF546Q86UE3 SUSD6-201ENST00000342745 5388 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
ZNF546Q86UE3 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC12.5□□□□□ -0.41
ZNF546Q86UE3 MLPH-201ENST00000264605 3823 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
ZNF546Q86UE3 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
ZNF546Q86UE3 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
ZNF546Q86UE3 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC12.5□□□□□ -0.41
ZNF546Q86UE3 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC12.5□□□□□ -0.41
ZNF546Q86UE3 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
ZNF546Q86UE3 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC12.5□□□□□ -0.41
ZNF546Q86UE3 AC092474.2-201ENST00000424288 719 ntBASIC12.5□□□□□ -0.41
ZNF546Q86UE3 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC12.5□□□□□ -0.41
ZNF546Q86UE3 ELP6-209ENST00000446787 894 ntTSL 3 BASIC12.5□□□□□ -0.41
ZNF546Q86UE3 AC018712.1-201ENST00000455767 687 ntBASIC12.5□□□□□ -0.41
ZNF546Q86UE3 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
ZNF546Q86UE3 TPM1-226ENST00000560959 925 ntTSL 2 BASIC12.5□□□□□ -0.41
ZNF546Q86UE3 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC12.5□□□□□ -0.41
ZNF546Q86UE3 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
ZNF546Q86UE3 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC12.5□□□□□ -0.41
ZNF546Q86UE3 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
ZNF546Q86UE3 AC117500.6-201ENST00000624871 588 ntBASIC12.5□□□□□ -0.41
ZNF546Q86UE3 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC12.5□□□□□ -0.41
ZNF546Q86UE3 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
ZNF546Q86UE3 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC12.5□□□□□ -0.41
ZNF546Q86UE3 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
ZNF546Q86UE3 CREB3L4-204ENST00000368603 1557 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
ZNF546Q86UE3 SON-203ENST00000381679 7860 ntTSL 5 BASIC12.5□□□□□ -0.41
ZNF546Q86UE3 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
ZNF546Q86UE3 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
ZNF546Q86UE3 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
ZNF546Q86UE3 UBE3A-228ENST00000638155 9131 ntAPPRIS P3 TSL 5 BASIC12.5□□□□□ -0.41
ZNF546Q86UE3 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC12.5□□□□□ -0.41
ZNF546Q86UE3 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
ZNF546Q86UE3 CCDC126-202ENST00000409765 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
ZNF546Q86UE3 SFMBT2-203ENST00000379713 2402 ntTSL 2 BASIC12.5□□□□□ -0.41
ZNF546Q86UE3 INMT-201ENST00000013222 2559 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
ZNF546Q86UE3 CDK11B-203ENST00000341832 2998 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
ZNF546Q86UE3 AC016245.1-201ENST00000570335 3204 ntTSL 2 BASIC12.5□□□□□ -0.41
ZNF546Q86UE3 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
ZNF546Q86UE3 DAB2IP-202ENST00000309989 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
ZNF546Q86UE3 TRDMT1-203ENST00000377799 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
ZNF546Q86UE3 ADAMTSL2-201ENST00000354484 4068 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
ZNF546Q86UE3 EXOC6B-201ENST00000272427 5918 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
ZNF546Q86UE3 CIITA-213ENST00000618327 4657 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
ZNF546Q86UE3 C15orf39-202ENST00000394987 4430 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
ZNF546Q86UE3 FBXL18-201ENST00000382368 3498 ntAPPRIS P2 TSL 5 BASIC12.49□□□□□ -0.41
ZNF546Q86UE3 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
ZNF546Q86UE3 DLX1-203ENST00000361725 2640 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
ZNF546Q86UE3 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC12.49□□□□□ -0.41
ZNF546Q86UE3 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC12.49□□□□□ -0.41
ZNF546Q86UE3 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC12.49□□□□□ -0.41
ZNF546Q86UE3 PPFIA4-203ENST00000367240 6434 ntAPPRIS P5 TSL 5 BASIC12.49□□□□□ -0.41
ZNF546Q86UE3 NEK4-201ENST00000233027 6057 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
ZNF546Q86UE3 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
ZNF546Q86UE3 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
ZNF546Q86UE3 FP325330.2-201ENST00000624219 5630 ntBASIC12.49□□□□□ -0.41
ZNF546Q86UE3 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
ZNF546Q86UE3 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC12.49□□□□□ -0.41
ZNF546Q86UE3 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
ZNF546Q86UE3 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC12.49□□□□□ -0.41
ZNF546Q86UE3 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
ZNF546Q86UE3 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
ZNF546Q86UE3 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
ZNF546Q86UE3 AC020910.6-201ENST00000623084 1459 ntBASIC12.49□□□□□ -0.41
ZNF546Q86UE3 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
ZNF546Q86UE3 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC12.49□□□□□ -0.41
ZNF546Q86UE3 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
ZNF546Q86UE3 CENPM-204ENST00000402420 688 ntTSL 5 BASIC12.49□□□□□ -0.41
ZNF546Q86UE3 DDT-204ENST00000404092 805 ntTSL 3 BASIC12.49□□□□□ -0.41
ZNF546Q86UE3 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC12.49□□□□□ -0.41
ZNF546Q86UE3 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC12.49□□□□□ -0.41
ZNF546Q86UE3 AC136604.1-201ENST00000418535 575 ntBASIC12.49□□□□□ -0.41
ZNF546Q86UE3 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC12.49□□□□□ -0.41
ZNF546Q86UE3 VN2R19P-201ENST00000442399 1052 ntBASIC12.49□□□□□ -0.41
ZNF546Q86UE3 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
ZNF546Q86UE3 SKP2-204ENST00000508514 821 ntTSL 3 BASIC12.49□□□□□ -0.41
ZNF546Q86UE3 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC12.49□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms