Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 HLA-V-201ENST00000429037 534 ntBASIC15.07■□□□□ 0
LYSMD3Q7Z3D4 AC022210.1-201ENST00000449856 793 ntBASIC15.07■□□□□ 0
LYSMD3Q7Z3D4 AC090142.2-201ENST00000483263 416 ntBASIC15.07■□□□□ 0
LYSMD3Q7Z3D4 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC15.07■□□□□ 0
LYSMD3Q7Z3D4 RNA5SP486-201ENST00000515961 83 ntBASIC15.07■□□□□ 0
LYSMD3Q7Z3D4 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC15.07■□□□□ 0
LYSMD3Q7Z3D4 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC15.07■□□□□ 0
LYSMD3Q7Z3D4 AC078819.1-201ENST00000547454 765 ntBASIC15.07■□□□□ 0
LYSMD3Q7Z3D4 AC012085.1-201ENST00000548270 765 ntBASIC15.07■□□□□ 0
LYSMD3Q7Z3D4 SNX29P1-201ENST00000548357 1007 ntBASIC15.07■□□□□ 0
LYSMD3Q7Z3D4 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC15.07■□□□□ 0
LYSMD3Q7Z3D4 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC15.07■□□□□ 0
LYSMD3Q7Z3D4 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
LYSMD3Q7Z3D4 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
LYSMD3Q7Z3D4 LARP4-220ENST00000615080 856 ntTSL 5 BASIC15.07■□□□□ 0
LYSMD3Q7Z3D4 AC138951.2-201ENST00000623455 1161 ntBASIC15.07■□□□□ 0
LYSMD3Q7Z3D4 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC15.07■□□□□ 0
LYSMD3Q7Z3D4 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC15.07■□□□□ 0
LYSMD3Q7Z3D4 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC15.07■□□□□ 0
LYSMD3Q7Z3D4 CLUHP2-201ENST00000426660 1303 ntBASIC15.07■□□□□ 0
LYSMD3Q7Z3D4 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC15.07■□□□□ 0
LYSMD3Q7Z3D4 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC15.07■□□□□ 0
LYSMD3Q7Z3D4 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC15.07■□□□□ 0
LYSMD3Q7Z3D4 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
LYSMD3Q7Z3D4 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC15.07■□□□□ 0
LYSMD3Q7Z3D4 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
LYSMD3Q7Z3D4 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
LYSMD3Q7Z3D4 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
LYSMD3Q7Z3D4 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC15.06■□□□□ 0
LYSMD3Q7Z3D4 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC15.06■□□□□ 0
LYSMD3Q7Z3D4 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC15.06■□□□□ 0
LYSMD3Q7Z3D4 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
LYSMD3Q7Z3D4 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
LYSMD3Q7Z3D4 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC15.06■□□□□ 0
LYSMD3Q7Z3D4 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC15.06■□□□□ 0
LYSMD3Q7Z3D4 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC15.06■□□□□ 0
LYSMD3Q7Z3D4 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC15.06■□□□□ 0
LYSMD3Q7Z3D4 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
LYSMD3Q7Z3D4 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC15.06■□□□□ 0
LYSMD3Q7Z3D4 AC232323.1-201ENST00000540724 2099 ntBASIC15.06■□□□□ 0
LYSMD3Q7Z3D4 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC15.06■□□□□ 0
LYSMD3Q7Z3D4 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
LYSMD3Q7Z3D4 MIR658-201ENST00000385210 100 ntBASIC15.06■□□□□ 0
LYSMD3Q7Z3D4 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC15.06■□□□□ 0
LYSMD3Q7Z3D4 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
LYSMD3Q7Z3D4 CTBP2P5-201ENST00000454986 1264 ntBASIC15.06■□□□□ 0
LYSMD3Q7Z3D4 RGS1-203ENST00000469578 1034 ntTSL 2 BASIC15.06■□□□□ 0
LYSMD3Q7Z3D4 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
LYSMD3Q7Z3D4 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC15.06■□□□□ 0
LYSMD3Q7Z3D4 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC15.06■□□□□ 0
LYSMD3Q7Z3D4 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC15.06■□□□□ 0
LYSMD3Q7Z3D4 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC15.06■□□□□ 0
LYSMD3Q7Z3D4 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC15.06■□□□□ 0
LYSMD3Q7Z3D4 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
LYSMD3Q7Z3D4 RPL28-206ENST00000558752 671 ntTSL 3 BASIC15.06■□□□□ 0
LYSMD3Q7Z3D4 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC15.06■□□□□ 0
LYSMD3Q7Z3D4 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
LYSMD3Q7Z3D4 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
LYSMD3Q7Z3D4 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC15.06■□□□□ 0
LYSMD3Q7Z3D4 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC15.06■□□□□ 0
LYSMD3Q7Z3D4 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
LYSMD3Q7Z3D4 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC15.06■□□□□ 0
LYSMD3Q7Z3D4 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
LYSMD3Q7Z3D4 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC15.06■□□□□ 0
LYSMD3Q7Z3D4 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC15.06■□□□□ 0
LYSMD3Q7Z3D4 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
LYSMD3Q7Z3D4 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
LYSMD3Q7Z3D4 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC15.06■□□□□ 0
LYSMD3Q7Z3D4 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
LYSMD3Q7Z3D4 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
LYSMD3Q7Z3D4 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
LYSMD3Q7Z3D4 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
LYSMD3Q7Z3D4 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
LYSMD3Q7Z3D4 AC018442.1-201ENST00000421439 2061 ntBASIC15.05■□□□□ 0
LYSMD3Q7Z3D4 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC15.05■□□□□ 0
LYSMD3Q7Z3D4 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC15.05■□□□□ 0
LYSMD3Q7Z3D4 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
LYSMD3Q7Z3D4 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
LYSMD3Q7Z3D4 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
LYSMD3Q7Z3D4 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
LYSMD3Q7Z3D4 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
LYSMD3Q7Z3D4 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC15.05■□□□□ 0
LYSMD3Q7Z3D4 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
LYSMD3Q7Z3D4 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC15.05■□□□□ -0
LYSMD3Q7Z3D4 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC15.05■□□□□ -0
LYSMD3Q7Z3D4 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC15.05■□□□□ -0
LYSMD3Q7Z3D4 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
LYSMD3Q7Z3D4 MPV17-205ENST00000402310 906 ntTSL 5 BASIC15.05■□□□□ -0
LYSMD3Q7Z3D4 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
LYSMD3Q7Z3D4 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC15.05■□□□□ -0
LYSMD3Q7Z3D4 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC15.05■□□□□ -0
LYSMD3Q7Z3D4 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC15.05■□□□□ -0
LYSMD3Q7Z3D4 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC15.05■□□□□ -0
LYSMD3Q7Z3D4 RPL7P3-201ENST00000441388 714 ntBASIC15.05■□□□□ -0
LYSMD3Q7Z3D4 KLF2P4-201ENST00000451959 1225 ntBASIC15.05■□□□□ -0
LYSMD3Q7Z3D4 AC104989.1-201ENST00000519711 778 ntBASIC15.05■□□□□ -0
LYSMD3Q7Z3D4 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC15.05■□□□□ -0
LYSMD3Q7Z3D4 AP005482.1-201ENST00000563722 1273 ntBASIC15.05■□□□□ -0
LYSMD3Q7Z3D4 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC15.05■□□□□ -0
LYSMD3Q7Z3D4 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC15.05■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 64.3 ms