Protein–RNA interactions for Protein: Q4VXA5

KHDC1, KH homology domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KHDC1Q4VXA5 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
KHDC1Q4VXA5 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
KHDC1Q4VXA5 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
KHDC1Q4VXA5 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC15.21■□□□□ 0.03
KHDC1Q4VXA5 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
KHDC1Q4VXA5 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
KHDC1Q4VXA5 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
KHDC1Q4VXA5 AC104457.1-201ENST00000401024 814 ntBASIC15.21■□□□□ 0.03
KHDC1Q4VXA5 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC15.21■□□□□ 0.03
KHDC1Q4VXA5 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
KHDC1Q4VXA5 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC15.21■□□□□ 0.03
KHDC1Q4VXA5 AC011495.1-201ENST00000498085 584 ntBASIC15.21■□□□□ 0.03
KHDC1Q4VXA5 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
KHDC1Q4VXA5 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC15.21■□□□□ 0.03
KHDC1Q4VXA5 FUZ-207ENST00000526575 482 ntTSL 4 BASIC15.21■□□□□ 0.03
KHDC1Q4VXA5 CR383656.12-201ENST00000549567 513 ntBASIC15.21■□□□□ 0.03
KHDC1Q4VXA5 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC15.21■□□□□ 0.03
KHDC1Q4VXA5 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC15.21■□□□□ 0.03
KHDC1Q4VXA5 MIR5189-201ENST00000577370 114 ntBASIC15.21■□□□□ 0.03
KHDC1Q4VXA5 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC15.21■□□□□ 0.03
KHDC1Q4VXA5 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC15.21■□□□□ 0.03
KHDC1Q4VXA5 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC15.21■□□□□ 0.03
KHDC1Q4VXA5 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC15.21■□□□□ 0.03
KHDC1Q4VXA5 AL645728.2-202ENST00000641679 227 ntBASIC15.21■□□□□ 0.03
KHDC1Q4VXA5 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC15.21■□□□□ 0.03
KHDC1Q4VXA5 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
KHDC1Q4VXA5 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
KHDC1Q4VXA5 AC092135.3-201ENST00000624151 1846 ntBASIC15.21■□□□□ 0.03
KHDC1Q4VXA5 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
KHDC1Q4VXA5 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
KHDC1Q4VXA5 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
KHDC1Q4VXA5 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
KHDC1Q4VXA5 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
KHDC1Q4VXA5 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
KHDC1Q4VXA5 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
KHDC1Q4VXA5 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
KHDC1Q4VXA5 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
KHDC1Q4VXA5 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
KHDC1Q4VXA5 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.02
KHDC1Q4VXA5 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
KHDC1Q4VXA5 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC15.21■□□□□ 0.02
KHDC1Q4VXA5 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
KHDC1Q4VXA5 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC15.21■□□□□ 0.02
KHDC1Q4VXA5 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC15.2■□□□□ 0.02
KHDC1Q4VXA5 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC15.2■□□□□ 0.02
KHDC1Q4VXA5 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
KHDC1Q4VXA5 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
KHDC1Q4VXA5 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
KHDC1Q4VXA5 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
KHDC1Q4VXA5 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
KHDC1Q4VXA5 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
KHDC1Q4VXA5 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
KHDC1Q4VXA5 AC007787.1-201ENST00000588095 1583 ntBASIC15.2■□□□□ 0.02
KHDC1Q4VXA5 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC15.2■□□□□ 0.02
KHDC1Q4VXA5 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
KHDC1Q4VXA5 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
KHDC1Q4VXA5 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
KHDC1Q4VXA5 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
KHDC1Q4VXA5 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
KHDC1Q4VXA5 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC15.2■□□□□ 0.02
KHDC1Q4VXA5 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
KHDC1Q4VXA5 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
KHDC1Q4VXA5 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
KHDC1Q4VXA5 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC15.2■□□□□ 0.02
KHDC1Q4VXA5 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC15.2■□□□□ 0.02
KHDC1Q4VXA5 TTTY23B-201ENST00000442790 549 ntBASIC15.2■□□□□ 0.02
KHDC1Q4VXA5 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC15.2■□□□□ 0.02
KHDC1Q4VXA5 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC15.2■□□□□ 0.02
KHDC1Q4VXA5 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC15.2■□□□□ 0.02
KHDC1Q4VXA5 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC15.2■□□□□ 0.02
KHDC1Q4VXA5 GIMAP3P-201ENST00000495150 836 ntBASIC15.2■□□□□ 0.02
KHDC1Q4VXA5 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC15.2■□□□□ 0.02
KHDC1Q4VXA5 ENPP7P5-201ENST00000541031 1031 ntBASIC15.2■□□□□ 0.02
KHDC1Q4VXA5 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
KHDC1Q4VXA5 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC15.2■□□□□ 0.02
KHDC1Q4VXA5 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC15.2■□□□□ 0.02
KHDC1Q4VXA5 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC15.2■□□□□ 0.02
KHDC1Q4VXA5 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC15.2■□□□□ 0.02
KHDC1Q4VXA5 AC008735.3-201ENST00000596646 500 ntBASIC15.2■□□□□ 0.02
KHDC1Q4VXA5 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
KHDC1Q4VXA5 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC15.2■□□□□ 0.02
KHDC1Q4VXA5 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
KHDC1Q4VXA5 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC15.2■□□□□ 0.02
KHDC1Q4VXA5 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
KHDC1Q4VXA5 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC15.2■□□□□ 0.02
KHDC1Q4VXA5 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC15.2■□□□□ 0.02
KHDC1Q4VXA5 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
KHDC1Q4VXA5 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
KHDC1Q4VXA5 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
KHDC1Q4VXA5 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
KHDC1Q4VXA5 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC15.2■□□□□ 0.02
KHDC1Q4VXA5 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC15.2■□□□□ 0.02
KHDC1Q4VXA5 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
KHDC1Q4VXA5 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC15.2■□□□□ 0.02
KHDC1Q4VXA5 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC15.2■□□□□ 0.02
KHDC1Q4VXA5 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
KHDC1Q4VXA5 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
KHDC1Q4VXA5 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
KHDC1Q4VXA5 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
KHDC1Q4VXA5 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 61.7 ms