Protein–RNA interactions for Protein: Q2Q1W2

TRIM71, E3 ubiquitin-protein ligase TRIM71, humanhuman

Known RBP Predictions only

Length 868 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM71Q2Q1W2 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
TRIM71Q2Q1W2 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRIM71Q2Q1W2 HNRNPA1P27-201ENST00000412087 955 ntBASIC16.15■□□□□ 0.18
TRIM71Q2Q1W2 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC16.15■□□□□ 0.18
TRIM71Q2Q1W2 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC16.15■□□□□ 0.18
TRIM71Q2Q1W2 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC16.15■□□□□ 0.18
TRIM71Q2Q1W2 FKBP11-212ENST00000552878 1052 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
TRIM71Q2Q1W2 LINC01584-201ENST00000562495 676 ntTSL 5 BASIC16.15■□□□□ 0.18
TRIM71Q2Q1W2 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRIM71Q2Q1W2 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC16.15■□□□□ 0.18
TRIM71Q2Q1W2 HIST1H3C-201ENST00000612966 411 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
TRIM71Q2Q1W2 LINC01783-202ENST00000614408 828 ntBASIC16.15■□□□□ 0.18
TRIM71Q2Q1W2 WT1-AS_6.1-201ENST00000614919 121 ntBASIC16.15■□□□□ 0.18
TRIM71Q2Q1W2 BX284668.2-205ENST00000619677 828 ntBASIC16.15■□□□□ 0.18
TRIM71Q2Q1W2 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC16.15■□□□□ 0.18
TRIM71Q2Q1W2 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TRIM71Q2Q1W2 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRIM71Q2Q1W2 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TRIM71Q2Q1W2 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRIM71Q2Q1W2 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRIM71Q2Q1W2 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRIM71Q2Q1W2 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRIM71Q2Q1W2 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TRIM71Q2Q1W2 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRIM71Q2Q1W2 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRIM71Q2Q1W2 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRIM71Q2Q1W2 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TRIM71Q2Q1W2 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRIM71Q2Q1W2 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRIM71Q2Q1W2 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRIM71Q2Q1W2 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TRIM71Q2Q1W2 DOC2GP-204ENST00000639052 2548 ntBASIC16.14■□□□□ 0.17
TRIM71Q2Q1W2 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRIM71Q2Q1W2 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
TRIM71Q2Q1W2 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
TRIM71Q2Q1W2 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC16.14■□□□□ 0.17
TRIM71Q2Q1W2 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRIM71Q2Q1W2 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC16.14■□□□□ 0.17
TRIM71Q2Q1W2 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
TRIM71Q2Q1W2 GAD1-201ENST00000344257 1029 ntTSL 5 BASIC16.14■□□□□ 0.17
TRIM71Q2Q1W2 TMEM219-202ENST00000414689 1024 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRIM71Q2Q1W2 AL109767.1-201ENST00000429450 564 ntTSL 4 BASIC16.14■□□□□ 0.17
TRIM71Q2Q1W2 CSHL1-205ENST00000438387 566 ntTSL 5 BASIC16.14■□□□□ 0.17
TRIM71Q2Q1W2 AL080250.1-201ENST00000438676 445 ntTSL 5 BASIC16.14■□□□□ 0.17
TRIM71Q2Q1W2 AC130709.1-201ENST00000484779 1212 ntBASIC16.14■□□□□ 0.17
TRIM71Q2Q1W2 AC073573.1-201ENST00000550908 481 ntTSL 3 BASIC16.14■□□□□ 0.17
TRIM71Q2Q1W2 AC003686.1-201ENST00000550956 1034 ntBASIC16.14■□□□□ 0.17
TRIM71Q2Q1W2 DNM1P30-201ENST00000563586 452 ntBASIC16.14■□□□□ 0.17
TRIM71Q2Q1W2 TMEM219-204ENST00000566848 1292 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRIM71Q2Q1W2 AC020763.1-201ENST00000567186 551 ntTSL 4 BASIC16.14■□□□□ 0.17
TRIM71Q2Q1W2 PARD6G-AS1-205ENST00000589574 647 ntTSL 3 BASIC16.14■□□□□ 0.17
TRIM71Q2Q1W2 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TRIM71Q2Q1W2 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
TRIM71Q2Q1W2 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC16.14■□□□□ 0.17
TRIM71Q2Q1W2 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC16.14■□□□□ 0.17
TRIM71Q2Q1W2 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TRIM71Q2Q1W2 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TRIM71Q2Q1W2 AC245100.1-201ENST00000452996 1331 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TRIM71Q2Q1W2 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRIM71Q2Q1W2 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
TRIM71Q2Q1W2 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
TRIM71Q2Q1W2 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRIM71Q2Q1W2 AL590440.2-201ENST00000641973 1595 ntBASIC16.13■□□□□ 0.17
TRIM71Q2Q1W2 GSN-206ENST00000394353 2311 ntTSL 2 BASIC16.13■□□□□ 0.17
TRIM71Q2Q1W2 AC136621.1-201ENST00000624017 2304 ntBASIC16.13■□□□□ 0.17
TRIM71Q2Q1W2 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRIM71Q2Q1W2 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRIM71Q2Q1W2 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC16.13■□□□□ 0.17
TRIM71Q2Q1W2 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRIM71Q2Q1W2 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TRIM71Q2Q1W2 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC16.13■□□□□ 0.17
TRIM71Q2Q1W2 ODF4-201ENST00000328248 1156 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRIM71Q2Q1W2 MIR557-201ENST00000385239 98 ntBASIC16.13■□□□□ 0.17
TRIM71Q2Q1W2 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC16.13■□□□□ 0.17
TRIM71Q2Q1W2 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC16.13■□□□□ 0.17
TRIM71Q2Q1W2 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC16.13■□□□□ 0.17
TRIM71Q2Q1W2 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TRIM71Q2Q1W2 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC16.13■□□□□ 0.17
TRIM71Q2Q1W2 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC16.13■□□□□ 0.17
TRIM71Q2Q1W2 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC16.13■□□□□ 0.17
TRIM71Q2Q1W2 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC16.13■□□□□ 0.17
TRIM71Q2Q1W2 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC16.13■□□□□ 0.17
TRIM71Q2Q1W2 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC16.13■□□□□ 0.17
TRIM71Q2Q1W2 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC16.13■□□□□ 0.17
TRIM71Q2Q1W2 F10-203ENST00000409306 1450 ntTSL 3 BASIC16.13■□□□□ 0.17
TRIM71Q2Q1W2 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC16.13■□□□□ 0.17
TRIM71Q2Q1W2 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC16.13■□□□□ 0.17
TRIM71Q2Q1W2 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TRIM71Q2Q1W2 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC16.13■□□□□ 0.17
TRIM71Q2Q1W2 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRIM71Q2Q1W2 TMBIM7P-203ENST00000641617 1718 ntBASIC16.13■□□□□ 0.17
TRIM71Q2Q1W2 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
TRIM71Q2Q1W2 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRIM71Q2Q1W2 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TRIM71Q2Q1W2 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC16.13■□□□□ 0.17
TRIM71Q2Q1W2 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRIM71Q2Q1W2 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRIM71Q2Q1W2 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
TRIM71Q2Q1W2 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRIM71Q2Q1W2 OSER1-201ENST00000255174 1572 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 59.7 ms