Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC12.13□□□□□ -0.47
CX3CL1P78423 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
CX3CL1P78423 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC12.13□□□□□ -0.47
CX3CL1P78423 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CX3CL1P78423 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CX3CL1P78423 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CX3CL1P78423 AC140479.7-201ENST00000636301 2332 ntBASIC12.13□□□□□ -0.47
CX3CL1P78423 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CX3CL1P78423 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CX3CL1P78423 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
CX3CL1P78423 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
CX3CL1P78423 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
CX3CL1P78423 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC12.13□□□□□ -0.47
CX3CL1P78423 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
CX3CL1P78423 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC12.13□□□□□ -0.47
CX3CL1P78423 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
CX3CL1P78423 GLI4-203ENST00000517468 963 ntTSL 5 BASIC12.13□□□□□ -0.47
CX3CL1P78423 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC12.13□□□□□ -0.47
CX3CL1P78423 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC12.13□□□□□ -0.47
CX3CL1P78423 WASH4P-201ENST00000564273 1246 ntBASIC12.13□□□□□ -0.47
CX3CL1P78423 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC12.13□□□□□ -0.47
CX3CL1P78423 IFT20-206ENST00000578122 834 ntTSL 2 BASIC12.13□□□□□ -0.47
CX3CL1P78423 IFT20-208ENST00000578985 831 ntTSL 3 BASIC12.13□□□□□ -0.47
CX3CL1P78423 MIR3197-201ENST00000582241 73 ntBASIC12.13□□□□□ -0.47
CX3CL1P78423 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC12.13□□□□□ -0.47
CX3CL1P78423 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC12.13□□□□□ -0.47
CX3CL1P78423 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
CX3CL1P78423 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CX3CL1P78423 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
CX3CL1P78423 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC12.13□□□□□ -0.47
CX3CL1P78423 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
CX3CL1P78423 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC12.13□□□□□ -0.47
CX3CL1P78423 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
CX3CL1P78423 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CX3CL1P78423 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CX3CL1P78423 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
CX3CL1P78423 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
CX3CL1P78423 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
CX3CL1P78423 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CX3CL1P78423 PES1-204ENST00000402284 2144 ntTSL 5 BASIC12.13□□□□□ -0.47
CX3CL1P78423 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CX3CL1P78423 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
CX3CL1P78423 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
CX3CL1P78423 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
CX3CL1P78423 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC12.13□□□□□ -0.47
CX3CL1P78423 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
CX3CL1P78423 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
CX3CL1P78423 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CX3CL1P78423 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CX3CL1P78423 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CX3CL1P78423 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
CX3CL1P78423 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CX3CL1P78423 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CX3CL1P78423 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
CX3CL1P78423 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CX3CL1P78423 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC12.12□□□□□ -0.47
CX3CL1P78423 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CX3CL1P78423 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CX3CL1P78423 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CX3CL1P78423 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
CX3CL1P78423 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC12.12□□□□□ -0.47
CX3CL1P78423 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
CX3CL1P78423 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
CX3CL1P78423 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CX3CL1P78423 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CX3CL1P78423 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC12.12□□□□□ -0.47
CX3CL1P78423 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC12.12□□□□□ -0.47
CX3CL1P78423 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
CX3CL1P78423 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
CX3CL1P78423 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC12.12□□□□□ -0.47
CX3CL1P78423 AL162726.2-201ENST00000438986 1017 ntBASIC12.12□□□□□ -0.47
CX3CL1P78423 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CX3CL1P78423 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC12.12□□□□□ -0.47
CX3CL1P78423 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC12.12□□□□□ -0.47
CX3CL1P78423 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC12.12□□□□□ -0.47
CX3CL1P78423 CU634019.7-201ENST00000624153 1185 ntBASIC12.12□□□□□ -0.47
CX3CL1P78423 FP236241.2-201ENST00000624906 1185 ntBASIC12.12□□□□□ -0.47
CX3CL1P78423 AL033527.5-201ENST00000641382 801 ntBASIC12.12□□□□□ -0.47
CX3CL1P78423 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CX3CL1P78423 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
CX3CL1P78423 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
CX3CL1P78423 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CX3CL1P78423 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
CX3CL1P78423 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
CX3CL1P78423 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
CX3CL1P78423 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
CX3CL1P78423 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CX3CL1P78423 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CX3CL1P78423 ACE3P-201ENST00000423435 1973 ntBASIC12.12□□□□□ -0.47
CX3CL1P78423 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
CX3CL1P78423 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CX3CL1P78423 ST20-AS1-201ENST00000560255 4223 ntBASIC12.12□□□□□ -0.47
CX3CL1P78423 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
CX3CL1P78423 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
CX3CL1P78423 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CX3CL1P78423 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
CX3CL1P78423 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC12.11□□□□□ -0.47
CX3CL1P78423 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC12.11□□□□□ -0.47
CX3CL1P78423 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CX3CL1P78423 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 305.9 ms