Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 CECR7-204ENST00000609932 568 ntTSL 2 BASIC13.22□□□□□ -0.29
SEC61A1P61619 AC012645.4-201ENST00000610691 1061 ntBASIC13.22□□□□□ -0.29
SEC61A1P61619 AC116165.1-201ENST00000611806 668 ntBASIC13.22□□□□□ -0.29
SEC61A1P61619 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
SEC61A1P61619 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
SEC61A1P61619 MPI-203ENST00000535694 1523 ntTSL 2 BASIC13.22□□□□□ -0.29
SEC61A1P61619 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
SEC61A1P61619 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SEC61A1P61619 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
SEC61A1P61619 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
SEC61A1P61619 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
SEC61A1P61619 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
SEC61A1P61619 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
SEC61A1P61619 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
SEC61A1P61619 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SEC61A1P61619 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
SEC61A1P61619 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
SEC61A1P61619 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SEC61A1P61619 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
SEC61A1P61619 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SEC61A1P61619 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC13.21□□□□□ -0.29
SEC61A1P61619 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
SEC61A1P61619 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SEC61A1P61619 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
SEC61A1P61619 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
SEC61A1P61619 USP35-204ENST00000530267 2419 ntTSL 2 BASIC13.21□□□□□ -0.29
SEC61A1P61619 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SEC61A1P61619 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
SEC61A1P61619 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SEC61A1P61619 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SEC61A1P61619 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
SEC61A1P61619 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SEC61A1P61619 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC13.21□□□□□ -0.29
SEC61A1P61619 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SEC61A1P61619 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
SEC61A1P61619 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SEC61A1P61619 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SEC61A1P61619 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SEC61A1P61619 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC13.21□□□□□ -0.29
SEC61A1P61619 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC13.21□□□□□ -0.29
SEC61A1P61619 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
SEC61A1P61619 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SEC61A1P61619 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
SEC61A1P61619 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC13.21□□□□□ -0.29
SEC61A1P61619 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC13.21□□□□□ -0.29
SEC61A1P61619 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SEC61A1P61619 AC005034.1-201ENST00000426657 489 ntBASIC13.21□□□□□ -0.29
SEC61A1P61619 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC13.21□□□□□ -0.29
SEC61A1P61619 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
SEC61A1P61619 CD81-207ENST00000481687 890 ntTSL 2 BASIC13.21□□□□□ -0.29
SEC61A1P61619 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
SEC61A1P61619 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC13.21□□□□□ -0.29
SEC61A1P61619 FTH1-202ENST00000526640 786 ntTSL 2 BASIC13.21□□□□□ -0.29
SEC61A1P61619 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC13.21□□□□□ -0.29
SEC61A1P61619 TPRX2P-201ENST00000535362 881 ntBASIC13.21□□□□□ -0.29
SEC61A1P61619 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC13.21□□□□□ -0.29
SEC61A1P61619 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC13.21□□□□□ -0.29
SEC61A1P61619 AC005225.4-201ENST00000557330 545 ntBASIC13.21□□□□□ -0.29
SEC61A1P61619 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
SEC61A1P61619 WASH4P-201ENST00000564273 1246 ntBASIC13.21□□□□□ -0.29
SEC61A1P61619 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC13.21□□□□□ -0.29
SEC61A1P61619 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC13.21□□□□□ -0.29
SEC61A1P61619 CHCHD2P3-201ENST00000603038 451 ntBASIC13.21□□□□□ -0.29
SEC61A1P61619 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
SEC61A1P61619 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC13.21□□□□□ -0.29
SEC61A1P61619 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
SEC61A1P61619 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC13.21□□□□□ -0.29
SEC61A1P61619 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC13.21□□□□□ -0.29
SEC61A1P61619 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC13.21□□□□□ -0.29
SEC61A1P61619 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC13.21□□□□□ -0.29
SEC61A1P61619 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC13.21□□□□□ -0.29
SEC61A1P61619 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
SEC61A1P61619 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
SEC61A1P61619 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SEC61A1P61619 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SEC61A1P61619 AC089987.1-201ENST00000551654 2209 ntBASIC13.21□□□□□ -0.29
SEC61A1P61619 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SEC61A1P61619 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
SEC61A1P61619 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
SEC61A1P61619 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
SEC61A1P61619 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
SEC61A1P61619 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
SEC61A1P61619 GDPD2-204ENST00000536730 2171 ntTSL 2 BASIC13.21□□□□□ -0.3
SEC61A1P61619 CYP20A1-201ENST00000356079 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
SEC61A1P61619 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC13.21□□□□□ -0.3
SEC61A1P61619 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
SEC61A1P61619 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
SEC61A1P61619 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC13.21□□□□□ -0.3
SEC61A1P61619 CTBP1-AS2-206ENST00000581398 5652 ntBASIC13.21□□□□□ -0.3
SEC61A1P61619 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
SEC61A1P61619 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
SEC61A1P61619 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SEC61A1P61619 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
SEC61A1P61619 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
SEC61A1P61619 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SEC61A1P61619 STRN-202ENST00000379213 2254 ntTSL 5 BASIC13.2□□□□□ -0.3
SEC61A1P61619 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC13.2□□□□□ -0.3
SEC61A1P61619 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SEC61A1P61619 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
SEC61A1P61619 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms