Protein–RNA interactions for Protein: P61247

RPS3A, 40S ribosomal protein S3a, humanhuman

Known RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3AP61247 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RPS3AP61247 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
RPS3AP61247 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
RPS3AP61247 SH3TC2-202ENST00000502274 2681 ntTSL 2 BASIC14.16□□□□□ -0.14
RPS3AP61247 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RPS3AP61247 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
RPS3AP61247 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
RPS3AP61247 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
RPS3AP61247 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC14.15□□□□□ -0.14
RPS3AP61247 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC14.15□□□□□ -0.14
RPS3AP61247 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC14.15□□□□□ -0.14
RPS3AP61247 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RPS3AP61247 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RPS3AP61247 CD34-203ENST00000367036 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
RPS3AP61247 NDRG4-255ENST00000570248 3207 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
RPS3AP61247 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
RPS3AP61247 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RPS3AP61247 BRSK2-202ENST00000382179 3576 ntTSL 2 BASIC14.15□□□□□ -0.14
RPS3AP61247 SEPT6-201ENST00000343984 2693 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
RPS3AP61247 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC14.15□□□□□ -0.14
RPS3AP61247 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RPS3AP61247 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RPS3AP61247 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RPS3AP61247 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
RPS3AP61247 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
RPS3AP61247 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC14.15□□□□□ -0.14
RPS3AP61247 AL607033.1-201ENST00000623900 1599 ntBASIC14.15□□□□□ -0.14
RPS3AP61247 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
RPS3AP61247 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RPS3AP61247 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC14.15□□□□□ -0.14
RPS3AP61247 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RPS3AP61247 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
RPS3AP61247 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC14.15□□□□□ -0.14
RPS3AP61247 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC14.15□□□□□ -0.14
RPS3AP61247 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC14.15□□□□□ -0.14
RPS3AP61247 RPL13P2-201ENST00000440687 659 ntBASIC14.15□□□□□ -0.14
RPS3AP61247 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC14.15□□□□□ -0.14
RPS3AP61247 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC14.15□□□□□ -0.14
RPS3AP61247 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC14.15□□□□□ -0.14
RPS3AP61247 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC14.15□□□□□ -0.14
RPS3AP61247 AC099568.2-201ENST00000609194 695 ntBASIC14.15□□□□□ -0.14
RPS3AP61247 AL662799.1-202ENST00000614205 422 ntBASIC14.15□□□□□ -0.14
RPS3AP61247 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
RPS3AP61247 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC14.15□□□□□ -0.14
RPS3AP61247 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RPS3AP61247 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RPS3AP61247 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
RPS3AP61247 C2-206ENST00000442278 2434 ntTSL 2 BASIC14.15□□□□□ -0.14
RPS3AP61247 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RPS3AP61247 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RPS3AP61247 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RPS3AP61247 SLC22A2-202ENST00000366953 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RPS3AP61247 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC14.15□□□□□ -0.14
RPS3AP61247 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
RPS3AP61247 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC14.15□□□□□ -0.14
RPS3AP61247 FLII-221ENST00000578558 2377 ntTSL 5 BASIC14.15□□□□□ -0.14
RPS3AP61247 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC14.15□□□□□ -0.14
RPS3AP61247 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
RPS3AP61247 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RPS3AP61247 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RPS3AP61247 RHOH-224ENST00000622175 2254 ntAPPRIS P1 TSL 4 BASIC14.15□□□□□ -0.14
RPS3AP61247 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.15
RPS3AP61247 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC14.15□□□□□ -0.15
RPS3AP61247 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC14.15□□□□□ -0.15
RPS3AP61247 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.15
RPS3AP61247 TMCC2-201ENST00000329800 2818 ntTSL 2 BASIC14.14□□□□□ -0.15
RPS3AP61247 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC14.14□□□□□ -0.15
RPS3AP61247 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC14.14□□□□□ -0.15
RPS3AP61247 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
RPS3AP61247 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RPS3AP61247 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
RPS3AP61247 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
RPS3AP61247 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RPS3AP61247 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
RPS3AP61247 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
RPS3AP61247 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
RPS3AP61247 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RPS3AP61247 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RPS3AP61247 AC138969.3-201ENST00000546612 1459 ntBASIC14.14□□□□□ -0.15
RPS3AP61247 AC138932.2-201ENST00000548268 1459 ntBASIC14.14□□□□□ -0.15
RPS3AP61247 AC126755.4-201ENST00000549796 1459 ntBASIC14.14□□□□□ -0.15
RPS3AP61247 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RPS3AP61247 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC14.14□□□□□ -0.15
RPS3AP61247 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC14.14□□□□□ -0.15
RPS3AP61247 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RPS3AP61247 RPL15-213ENST00000611050 2363 ntAPPRIS P1 TSL 4 BASIC14.14□□□□□ -0.15
RPS3AP61247 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC14.14□□□□□ -0.15
RPS3AP61247 NIN-202ENST00000324330 4364 ntTSL 5 BASIC14.14□□□□□ -0.15
RPS3AP61247 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RPS3AP61247 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
RPS3AP61247 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RPS3AP61247 TOMM22P5-201ENST00000416399 439 ntBASIC14.14□□□□□ -0.15
RPS3AP61247 RHOA-206ENST00000454011 889 ntTSL 2 BASIC14.14□□□□□ -0.15
RPS3AP61247 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC14.14□□□□□ -0.15
RPS3AP61247 AC023310.3-201ENST00000557027 670 ntBASIC14.14□□□□□ -0.15
RPS3AP61247 AC100756.1-201ENST00000562736 682 ntBASIC14.14□□□□□ -0.15
RPS3AP61247 CMC2-214ENST00000565925 640 ntTSL 5 BASIC14.14□□□□□ -0.15
RPS3AP61247 AC138749.3-201ENST00000567691 622 ntBASIC14.14□□□□□ -0.15
RPS3AP61247 AC097359.3-201ENST00000603982 1210 ntBASIC14.14□□□□□ -0.15
RPS3AP61247 AC116165.1-201ENST00000611806 668 ntBASIC14.14□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 129.1 ms