Protein–RNA interactions for Protein: P61009

SPCS3, Signal peptidase complex subunit 3, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3P61009 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SPCS3P61009 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC12.29□□□□□ -0.44
SPCS3P61009 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
SPCS3P61009 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
SPCS3P61009 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
SPCS3P61009 GRM1-204ENST00000492807 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
SPCS3P61009 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC12.28□□□□□ -0.44
SPCS3P61009 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC12.28□□□□□ -0.44
SPCS3P61009 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SPCS3P61009 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC12.28□□□□□ -0.44
SPCS3P61009 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
SPCS3P61009 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
SPCS3P61009 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC12.28□□□□□ -0.44
SPCS3P61009 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
SPCS3P61009 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SPCS3P61009 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
SPCS3P61009 ZNF843-202ENST00000564218 3816 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
SPCS3P61009 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
SPCS3P61009 NOX5-201ENST00000260364 8592 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
SPCS3P61009 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
SPCS3P61009 CDC45-205ENST00000437685 2072 ntTSL 2 BASIC12.28□□□□□ -0.44
SPCS3P61009 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
SPCS3P61009 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SPCS3P61009 KIF3A-201ENST00000378735 3266 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SPCS3P61009 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SPCS3P61009 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC12.28□□□□□ -0.44
SPCS3P61009 GMPPB-203ENST00000480687 6108 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
SPCS3P61009 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SPCS3P61009 SLC26A6-213ENST00000455886 2460 ntTSL 2 BASIC12.28□□□□□ -0.44
SPCS3P61009 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC12.28□□□□□ -0.44
SPCS3P61009 PLSCR4-203ENST00000433593 2839 ntTSL 2 BASIC12.28□□□□□ -0.44
SPCS3P61009 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
SPCS3P61009 DYNC1LI1-201ENST00000273130 2504 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SPCS3P61009 SPATS2-201ENST00000321898 3158 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SPCS3P61009 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SPCS3P61009 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
SPCS3P61009 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SPCS3P61009 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
SPCS3P61009 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
SPCS3P61009 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SPCS3P61009 RPL30-202ENST00000396070 440 ntTSL 2 BASIC12.28□□□□□ -0.44
SPCS3P61009 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
SPCS3P61009 AC004461.1-201ENST00000412461 403 ntBASIC12.28□□□□□ -0.44
SPCS3P61009 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC12.28□□□□□ -0.44
SPCS3P61009 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC12.28□□□□□ -0.44
SPCS3P61009 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC12.28□□□□□ -0.44
SPCS3P61009 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
SPCS3P61009 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC12.28□□□□□ -0.44
SPCS3P61009 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC12.28□□□□□ -0.44
SPCS3P61009 AC093520.2-201ENST00000561830 333 ntBASIC12.28□□□□□ -0.44
SPCS3P61009 SAMD11P1-201ENST00000571429 661 ntBASIC12.28□□□□□ -0.44
SPCS3P61009 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC12.28□□□□□ -0.44
SPCS3P61009 MIR6080-201ENST00000617359 66 ntBASIC12.28□□□□□ -0.44
SPCS3P61009 RAB34-224ENST00000636513 888 ntTSL 5 BASIC12.28□□□□□ -0.44
SPCS3P61009 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
SPCS3P61009 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC12.28□□□□□ -0.44
SPCS3P61009 GDPD5-201ENST00000336898 3523 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SPCS3P61009 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SPCS3P61009 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
SPCS3P61009 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
SPCS3P61009 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SPCS3P61009 GRAMD4P3-201ENST00000621665 1669 ntBASIC12.28□□□□□ -0.44
SPCS3P61009 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC12.28□□□□□ -0.44
SPCS3P61009 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
SPCS3P61009 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
SPCS3P61009 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
SPCS3P61009 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
SPCS3P61009 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SPCS3P61009 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SPCS3P61009 KCNMA1-287ENST00000640632 2808 ntTSL 2 BASIC12.28□□□□□ -0.44
SPCS3P61009 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC12.28□□□□□ -0.44
SPCS3P61009 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
SPCS3P61009 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SPCS3P61009 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC12.28□□□□□ -0.44
SPCS3P61009 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
SPCS3P61009 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC12.28□□□□□ -0.44
SPCS3P61009 KLHL34-201ENST00000379499 3641 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
SPCS3P61009 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
SPCS3P61009 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
SPCS3P61009 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC12.27□□□□□ -0.44
SPCS3P61009 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
SPCS3P61009 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
SPCS3P61009 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC12.27□□□□□ -0.44
SPCS3P61009 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
SPCS3P61009 DLX1-203ENST00000361725 2640 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
SPCS3P61009 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
SPCS3P61009 TBC1D26-201ENST00000437605 1868 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
SPCS3P61009 NCSTN-202ENST00000368063 3031 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
SPCS3P61009 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
SPCS3P61009 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC12.27□□□□□ -0.44
SPCS3P61009 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
SPCS3P61009 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
SPCS3P61009 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
SPCS3P61009 AC097359.2-201ENST00000604992 2389 ntBASIC12.27□□□□□ -0.44
SPCS3P61009 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
SPCS3P61009 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC12.27□□□□□ -0.44
SPCS3P61009 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC12.27□□□□□ -0.44
SPCS3P61009 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.44
SPCS3P61009 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC12.27□□□□□ -0.44
SPCS3P61009 C10orf88-204ENST00000481909 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms