Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC12.9□□□□□ -0.34
AP3S2P59780 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
AP3S2P59780 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
AP3S2P59780 MAX-210ENST00000555419 765 ntTSL 5 BASIC12.9□□□□□ -0.34
AP3S2P59780 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC12.9□□□□□ -0.34
AP3S2P59780 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC12.9□□□□□ -0.34
AP3S2P59780 UBL5-208ENST00000593087 320 ntTSL 3 BASIC12.9□□□□□ -0.34
AP3S2P59780 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC12.9□□□□□ -0.34
AP3S2P59780 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC12.9□□□□□ -0.34
AP3S2P59780 AC025181.2-201ENST00000606994 802 ntBASIC12.9□□□□□ -0.34
AP3S2P59780 IFNL4P1-201ENST00000607083 540 ntBASIC12.9□□□□□ -0.34
AP3S2P59780 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC12.9□□□□□ -0.34
AP3S2P59780 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC12.9□□□□□ -0.34
AP3S2P59780 CACNA1C-214ENST00000399634 7590 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
AP3S2P59780 CACNA1C-222ENST00000406454 7590 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
AP3S2P59780 RAVER1-206ENST00000611074 3586 ntAPPRIS P2 TSL 5 BASIC12.9□□□□□ -0.34
AP3S2P59780 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
AP3S2P59780 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
AP3S2P59780 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
AP3S2P59780 GRN-214ENST00000589265 1632 ntTSL 5 BASIC12.9□□□□□ -0.34
AP3S2P59780 SCN8A-202ENST00000355133 5820 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
AP3S2P59780 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC12.9□□□□□ -0.34
AP3S2P59780 LINC01782-201ENST00000591212 2908 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
AP3S2P59780 ZNF862-201ENST00000223210 6950 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
AP3S2P59780 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC12.9□□□□□ -0.34
AP3S2P59780 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC12.9□□□□□ -0.34
AP3S2P59780 APOB-202ENST00000399256 3128 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
AP3S2P59780 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
AP3S2P59780 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
AP3S2P59780 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC12.9□□□□□ -0.34
AP3S2P59780 MYRF-202ENST00000278836 5927 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
AP3S2P59780 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC12.9□□□□□ -0.35
AP3S2P59780 LCA5-202ENST00000392959 4719 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
AP3S2P59780 VPS52-212ENST00000445902 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
AP3S2P59780 DLGAP1-201ENST00000315677 6683 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.35
AP3S2P59780 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC12.9□□□□□ -0.35
AP3S2P59780 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
AP3S2P59780 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
AP3S2P59780 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
AP3S2P59780 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
AP3S2P59780 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC12.89□□□□□ -0.35
AP3S2P59780 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
AP3S2P59780 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC12.89□□□□□ -0.35
AP3S2P59780 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
AP3S2P59780 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC12.89□□□□□ -0.35
AP3S2P59780 AC073957.3-201ENST00000609998 6758 ntBASIC12.89□□□□□ -0.35
AP3S2P59780 FAM219A-201ENST00000297620 3588 ntAPPRIS P3 TSL 2 BASIC12.89□□□□□ -0.35
AP3S2P59780 TAS1R3-201ENST00000339381 3433 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
AP3S2P59780 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
AP3S2P59780 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC12.89□□□□□ -0.35
AP3S2P59780 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
AP3S2P59780 NCOR2-201ENST00000356219 7226 ntTSL 5 BASIC12.89□□□□□ -0.35
AP3S2P59780 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
AP3S2P59780 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC12.89□□□□□ -0.35
AP3S2P59780 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
AP3S2P59780 ARHGAP10-201ENST00000336498 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
AP3S2P59780 AKR1C7P-201ENST00000305623 895 ntBASIC12.89□□□□□ -0.35
AP3S2P59780 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
AP3S2P59780 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
AP3S2P59780 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
AP3S2P59780 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC12.89□□□□□ -0.35
AP3S2P59780 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC12.89□□□□□ -0.35
AP3S2P59780 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC12.89□□□□□ -0.35
AP3S2P59780 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC12.89□□□□□ -0.35
AP3S2P59780 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC12.89□□□□□ -0.35
AP3S2P59780 AC012640.2-201ENST00000561606 901 ntBASIC12.89□□□□□ -0.35
AP3S2P59780 TBCB-211ENST00000589996 724 ntTSL 3 BASIC12.89□□□□□ -0.35
AP3S2P59780 AC027307.2-201ENST00000591252 911 ntBASIC12.89□□□□□ -0.35
AP3S2P59780 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC12.89□□□□□ -0.35
AP3S2P59780 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
AP3S2P59780 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC12.89□□□□□ -0.35
AP3S2P59780 SYK-203ENST00000375751 4936 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
AP3S2P59780 FAM90A12P-201ENST00000519497 2375 ntBASIC12.89□□□□□ -0.35
AP3S2P59780 FAM90A24P-201ENST00000520792 2369 ntBASIC12.89□□□□□ -0.35
AP3S2P59780 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
AP3S2P59780 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC12.89□□□□□ -0.35
AP3S2P59780 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
AP3S2P59780 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC12.89□□□□□ -0.35
AP3S2P59780 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
AP3S2P59780 GIPC3-201ENST00000322315 4335 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
AP3S2P59780 AMOTL2-202ENST00000422605 4335 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
AP3S2P59780 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
AP3S2P59780 ELK1-201ENST00000247161 2695 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
AP3S2P59780 VPS9D1-202ENST00000561976 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
AP3S2P59780 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC12.89□□□□□ -0.35
AP3S2P59780 AL356258.1-201ENST00000605929 2246 ntTSL 2 BASIC12.89□□□□□ -0.35
AP3S2P59780 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
AP3S2P59780 AP000347.1-201ENST00000417194 5004 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
AP3S2P59780 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
AP3S2P59780 APAF1-202ENST00000357310 7055 ntAPPRIS ALT1 TSL 5 BASIC12.89□□□□□ -0.35
AP3S2P59780 CD99L2-208ENST00000613030 3742 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
AP3S2P59780 CFAP65-208ENST00000453220 5877 ntAPPRIS P4 TSL 5 BASIC12.89□□□□□ -0.35
AP3S2P59780 MAN2B1-203ENST00000456935 3184 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
AP3S2P59780 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
AP3S2P59780 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
AP3S2P59780 PER3-208ENST00000613533 6318 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
AP3S2P59780 ANTXR2-203ENST00000403729 8273 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
AP3S2P59780 IGHG4-202ENST00000641978 2597 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
AP3S2P59780 SLC4A5-205ENST00000394019 6348 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
AP3S2P59780 ACACA-237ENST00000616317 9961 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms