Protein–RNA interactions for Protein: P59074

CHMP4BP1, Putative charged multivesicular body protein 4B-like protein CHMP4BP1, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1P59074 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC17.19■□□□□ 0.34
CHMP4BP1P59074 MFF-204ENST00000353339 2186 ntTSL 5 BASIC17.19■□□□□ 0.34
CHMP4BP1P59074 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
CHMP4BP1P59074 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CHMP4BP1P59074 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC17.19■□□□□ 0.34
CHMP4BP1P59074 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC17.19■□□□□ 0.34
CHMP4BP1P59074 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
CHMP4BP1P59074 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CHMP4BP1P59074 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CHMP4BP1P59074 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CHMP4BP1P59074 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC17.18■□□□□ 0.34
CHMP4BP1P59074 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CHMP4BP1P59074 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CHMP4BP1P59074 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CHMP4BP1P59074 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CHMP4BP1P59074 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC17.18■□□□□ 0.34
CHMP4BP1P59074 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC17.18■□□□□ 0.34
CHMP4BP1P59074 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CHMP4BP1P59074 AC013726.1-201ENST00000563747 2285 ntBASIC17.18■□□□□ 0.34
CHMP4BP1P59074 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
CHMP4BP1P59074 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
CHMP4BP1P59074 AC148477.4-201ENST00000613430 1793 ntBASIC17.18■□□□□ 0.34
CHMP4BP1P59074 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CHMP4BP1P59074 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC17.18■□□□□ 0.34
CHMP4BP1P59074 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CHMP4BP1P59074 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CHMP4BP1P59074 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
CHMP4BP1P59074 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CHMP4BP1P59074 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CHMP4BP1P59074 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CHMP4BP1P59074 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CHMP4BP1P59074 HOMER2P2-201ENST00000451621 847 ntBASIC17.18■□□□□ 0.34
CHMP4BP1P59074 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC17.18■□□□□ 0.34
CHMP4BP1P59074 PFN2-205ENST00000461868 613 ntTSL 2 BASIC17.18■□□□□ 0.34
CHMP4BP1P59074 GAPDHP40-201ENST00000505218 1006 ntBASIC17.18■□□□□ 0.34
CHMP4BP1P59074 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC17.18■□□□□ 0.34
CHMP4BP1P59074 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC17.18■□□□□ 0.34
CHMP4BP1P59074 ACR-203ENST00000529621 708 ntTSL 5 BASIC17.18■□□□□ 0.34
CHMP4BP1P59074 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC17.18■□□□□ 0.34
CHMP4BP1P59074 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC17.18■□□□□ 0.34
CHMP4BP1P59074 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CHMP4BP1P59074 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
CHMP4BP1P59074 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CHMP4BP1P59074 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CHMP4BP1P59074 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CHMP4BP1P59074 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
CHMP4BP1P59074 AC007686.3-201ENST00000619017 3487 ntBASIC17.18■□□□□ 0.34
CHMP4BP1P59074 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CHMP4BP1P59074 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CHMP4BP1P59074 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC17.18■□□□□ 0.34
CHMP4BP1P59074 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
CHMP4BP1P59074 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CHMP4BP1P59074 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC17.18■□□□□ 0.34
CHMP4BP1P59074 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CHMP4BP1P59074 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
CHMP4BP1P59074 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CHMP4BP1P59074 AL390755.1-201ENST00000623716 2027 ntBASIC17.18■□□□□ 0.34
CHMP4BP1P59074 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
CHMP4BP1P59074 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CHMP4BP1P59074 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CHMP4BP1P59074 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CHMP4BP1P59074 TKT-202ENST00000423516 2075 ntTSL 2 BASIC17.17■□□□□ 0.34
CHMP4BP1P59074 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CHMP4BP1P59074 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC17.17■□□□□ 0.34
CHMP4BP1P59074 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CHMP4BP1P59074 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC17.17■□□□□ 0.34
CHMP4BP1P59074 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CHMP4BP1P59074 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CHMP4BP1P59074 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
CHMP4BP1P59074 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
CHMP4BP1P59074 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
CHMP4BP1P59074 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CHMP4BP1P59074 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
CHMP4BP1P59074 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
CHMP4BP1P59074 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CHMP4BP1P59074 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC17.17■□□□□ 0.34
CHMP4BP1P59074 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC17.17■□□□□ 0.34
CHMP4BP1P59074 AC006033.1-201ENST00000440505 426 ntBASIC17.17■□□□□ 0.34
CHMP4BP1P59074 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC17.17■□□□□ 0.34
CHMP4BP1P59074 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
CHMP4BP1P59074 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
CHMP4BP1P59074 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
CHMP4BP1P59074 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC17.17■□□□□ 0.34
CHMP4BP1P59074 NAT9-222ENST00000583476 583 ntTSL 3 BASIC17.17■□□□□ 0.34
CHMP4BP1P59074 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC17.17■□□□□ 0.34
CHMP4BP1P59074 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC17.17■□□□□ 0.34
CHMP4BP1P59074 AC132938.4-201ENST00000623835 848 ntBASIC17.17■□□□□ 0.34
CHMP4BP1P59074 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC17.17■□□□□ 0.34
CHMP4BP1P59074 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
CHMP4BP1P59074 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CHMP4BP1P59074 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CHMP4BP1P59074 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
CHMP4BP1P59074 C18orf15-201ENST00000623680 2534 ntBASIC17.17■□□□□ 0.34
CHMP4BP1P59074 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
CHMP4BP1P59074 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CHMP4BP1P59074 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CHMP4BP1P59074 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CHMP4BP1P59074 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CHMP4BP1P59074 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CHMP4BP1P59074 CELP-203ENST00000624767 2414 ntTSL 5 BASIC17.17■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 61 ms