Protein–RNA interactions for Protein: P57055

RIPPLY3, Protein ripply3, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3P57055 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
RIPPLY3P57055 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
RIPPLY3P57055 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
RIPPLY3P57055 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
RIPPLY3P57055 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC12.5□□□□□ -0.41
RIPPLY3P57055 KRTAP1-3-201ENST00000344363 972 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
RIPPLY3P57055 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
RIPPLY3P57055 LCE2C-201ENST00000368783 614 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
RIPPLY3P57055 CASP2-203ENST00000392925 616 ntTSL 3 BASIC12.5□□□□□ -0.41
RIPPLY3P57055 NDUFS7-203ENST00000414651 841 ntTSL 5 BASIC12.5□□□□□ -0.41
RIPPLY3P57055 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC12.5□□□□□ -0.41
RIPPLY3P57055 AL583839.1-201ENST00000445280 691 ntTSL 3 BASIC12.5□□□□□ -0.41
RIPPLY3P57055 AC006455.8-201ENST00000451381 351 ntTSL 3 BASIC12.5□□□□□ -0.41
RIPPLY3P57055 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC12.5□□□□□ -0.41
RIPPLY3P57055 RN7SL396P-201ENST00000471086 295 ntBASIC12.5□□□□□ -0.41
RIPPLY3P57055 FRMD4A-208ENST00000493380 1149 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
RIPPLY3P57055 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC12.5□□□□□ -0.41
RIPPLY3P57055 AAMDC-210ENST00000532481 690 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
RIPPLY3P57055 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC12.5□□□□□ -0.41
RIPPLY3P57055 STUB1-204ENST00000564370 875 ntTSL 2 BASIC12.5□□□□□ -0.41
RIPPLY3P57055 TXNDC17-208ENST00000574838 746 ntTSL 3 BASIC12.5□□□□□ -0.41
RIPPLY3P57055 NAT9-211ENST00000580632 799 ntTSL 3 BASIC12.5□□□□□ -0.41
RIPPLY3P57055 AC011481.2-201ENST00000585408 426 ntTSL 3 BASIC12.5□□□□□ -0.41
RIPPLY3P57055 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
RIPPLY3P57055 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC12.5□□□□□ -0.41
RIPPLY3P57055 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
RIPPLY3P57055 OCEL1-206ENST00000597836 1044 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
RIPPLY3P57055 AC092073.1-202ENST00000606020 653 ntTSL 3 BASIC12.5□□□□□ -0.41
RIPPLY3P57055 Metazoa_SRP.127-201ENST00000614914 302 ntBASIC12.5□□□□□ -0.41
RIPPLY3P57055 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
RIPPLY3P57055 STAG1-206ENST00000480733 1304 ntTSL 2 BASIC12.5□□□□□ -0.41
RIPPLY3P57055 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
RIPPLY3P57055 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
RIPPLY3P57055 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
RIPPLY3P57055 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC12.5□□□□□ -0.41
RIPPLY3P57055 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
RIPPLY3P57055 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC12.5□□□□□ -0.41
RIPPLY3P57055 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
RIPPLY3P57055 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
RIPPLY3P57055 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
RIPPLY3P57055 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC12.5□□□□□ -0.41
RIPPLY3P57055 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
RIPPLY3P57055 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
RIPPLY3P57055 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC12.5□□□□□ -0.41
RIPPLY3P57055 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
RIPPLY3P57055 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
RIPPLY3P57055 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC12.5□□□□□ -0.41
RIPPLY3P57055 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
RIPPLY3P57055 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
RIPPLY3P57055 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
RIPPLY3P57055 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
RIPPLY3P57055 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
RIPPLY3P57055 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
RIPPLY3P57055 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
RIPPLY3P57055 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
RIPPLY3P57055 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC12.5□□□□□ -0.41
RIPPLY3P57055 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
RIPPLY3P57055 AL161772.1-201ENST00000610494 4412 ntBASIC12.49□□□□□ -0.41
RIPPLY3P57055 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
RIPPLY3P57055 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
RIPPLY3P57055 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
RIPPLY3P57055 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
RIPPLY3P57055 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
RIPPLY3P57055 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
RIPPLY3P57055 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
RIPPLY3P57055 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
RIPPLY3P57055 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
RIPPLY3P57055 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
RIPPLY3P57055 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
RIPPLY3P57055 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
RIPPLY3P57055 AL603756.1-201ENST00000606511 2163 ntBASIC12.49□□□□□ -0.41
RIPPLY3P57055 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
RIPPLY3P57055 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
RIPPLY3P57055 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
RIPPLY3P57055 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC12.49□□□□□ -0.41
RIPPLY3P57055 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC12.49□□□□□ -0.41
RIPPLY3P57055 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC12.49□□□□□ -0.41
RIPPLY3P57055 CDC45-202ENST00000404724 1693 ntTSL 2 BASIC12.49□□□□□ -0.41
RIPPLY3P57055 UBE3C-202ENST00000389103 1626 ntTSL 5 BASIC12.49□□□□□ -0.41
RIPPLY3P57055 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
RIPPLY3P57055 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC12.49□□□□□ -0.41
RIPPLY3P57055 HERPUD1-202ENST00000344114 1388 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
RIPPLY3P57055 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
RIPPLY3P57055 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
RIPPLY3P57055 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
RIPPLY3P57055 CFL1P6-201ENST00000400899 494 ntBASIC12.49□□□□□ -0.41
RIPPLY3P57055 AL365295.1-203ENST00000435322 566 ntTSL 4 BASIC12.49□□□□□ -0.41
RIPPLY3P57055 AC004837.1-201ENST00000446267 564 ntBASIC12.49□□□□□ -0.41
RIPPLY3P57055 AC104073.2-201ENST00000453737 312 ntBASIC12.49□□□□□ -0.41
RIPPLY3P57055 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC12.49□□□□□ -0.41
RIPPLY3P57055 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC12.49□□□□□ -0.41
RIPPLY3P57055 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC12.49□□□□□ -0.41
RIPPLY3P57055 AC083801.1-201ENST00000491689 358 ntBASIC12.49□□□□□ -0.41
RIPPLY3P57055 LINC02228-201ENST00000507600 534 ntTSL 2 BASIC12.49□□□□□ -0.41
RIPPLY3P57055 AC090820.1-201ENST00000519722 591 ntBASIC12.49□□□□□ -0.41
RIPPLY3P57055 AC015712.5-201ENST00000558568 564 ntTSL 2 BASIC12.49□□□□□ -0.41
RIPPLY3P57055 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC12.49□□□□□ -0.41
RIPPLY3P57055 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
RIPPLY3P57055 PAM16-215ENST00000577031 548 ntTSL 4 BASIC12.49□□□□□ -0.41
RIPPLY3P57055 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC12.49□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms