Protein–RNA interactions for Protein: P50747

HLCS, Biotin--protein ligase, humanhuman

Predictions only

Length 726 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLCSP50747 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HLCSP50747 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC14.39□□□□□ -0.11
HLCSP50747 TK1-203ENST00000588734 1681 ntTSL 2 BASIC14.39□□□□□ -0.11
HLCSP50747 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
HLCSP50747 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HLCSP50747 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
HLCSP50747 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HLCSP50747 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC14.39□□□□□ -0.11
HLCSP50747 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
HLCSP50747 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HLCSP50747 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
HLCSP50747 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC14.38□□□□□ -0.11
HLCSP50747 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC14.38□□□□□ -0.11
HLCSP50747 SLC9A7P1-202ENST00000556476 2239 ntBASIC14.38□□□□□ -0.11
HLCSP50747 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HLCSP50747 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
HLCSP50747 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
HLCSP50747 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
HLCSP50747 HNRNPA1P48-201ENST00000562726 1377 ntBASIC14.38□□□□□ -0.11
HLCSP50747 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
HLCSP50747 INTS4P2-202ENST00000614726 2019 ntBASIC14.38□□□□□ -0.11
HLCSP50747 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
HLCSP50747 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HLCSP50747 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
HLCSP50747 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
HLCSP50747 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC14.38□□□□□ -0.11
HLCSP50747 MXI1-205ENST00000393134 889 ntTSL 2 BASIC14.38□□□□□ -0.11
HLCSP50747 SOCS2P1-201ENST00000417727 557 ntBASIC14.38□□□□□ -0.11
HLCSP50747 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC14.38□□□□□ -0.11
HLCSP50747 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC14.38□□□□□ -0.11
HLCSP50747 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
HLCSP50747 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC14.38□□□□□ -0.11
HLCSP50747 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
HLCSP50747 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC14.38□□□□□ -0.11
HLCSP50747 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC14.38□□□□□ -0.11
HLCSP50747 ENPP7P5-201ENST00000541031 1031 ntBASIC14.38□□□□□ -0.11
HLCSP50747 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC14.38□□□□□ -0.11
HLCSP50747 AL359711.2-201ENST00000563105 872 ntBASIC14.38□□□□□ -0.11
HLCSP50747 AC015936.2-201ENST00000593177 259 ntBASIC14.38□□□□□ -0.11
HLCSP50747 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC14.38□□□□□ -0.11
HLCSP50747 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC14.38□□□□□ -0.11
HLCSP50747 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC14.38□□□□□ -0.11
HLCSP50747 CU634019.7-201ENST00000624153 1185 ntBASIC14.38□□□□□ -0.11
HLCSP50747 FP236241.2-201ENST00000624906 1185 ntBASIC14.38□□□□□ -0.11
HLCSP50747 ABBA01031660.1-201ENST00000635219 756 ntBASIC14.38□□□□□ -0.11
HLCSP50747 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC14.38□□□□□ -0.11
HLCSP50747 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HLCSP50747 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
HLCSP50747 KCP-203ENST00000610776 5108 ntTSL 5 BASIC14.38□□□□□ -0.11
HLCSP50747 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HLCSP50747 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HLCSP50747 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HLCSP50747 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
HLCSP50747 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
HLCSP50747 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC14.38□□□□□ -0.11
HLCSP50747 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HLCSP50747 AC089987.1-201ENST00000551654 2209 ntBASIC14.38□□□□□ -0.11
HLCSP50747 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC14.38□□□□□ -0.11
HLCSP50747 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
HLCSP50747 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HLCSP50747 TNN-203ENST00000622870 3719 ntTSL 5 BASIC14.38□□□□□ -0.11
HLCSP50747 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC14.38□□□□□ -0.11
HLCSP50747 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HLCSP50747 DGCR9-201ENST00000609630 2415 ntBASIC14.37□□□□□ -0.11
HLCSP50747 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HLCSP50747 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HLCSP50747 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
HLCSP50747 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
HLCSP50747 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
HLCSP50747 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
HLCSP50747 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
HLCSP50747 AP001267.2-201ENST00000532619 2086 ntBASIC14.37□□□□□ -0.11
HLCSP50747 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC14.37□□□□□ -0.11
HLCSP50747 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
HLCSP50747 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
HLCSP50747 ST20-AS1-201ENST00000560255 4223 ntBASIC14.37□□□□□ -0.11
HLCSP50747 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
HLCSP50747 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HLCSP50747 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
HLCSP50747 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
HLCSP50747 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
HLCSP50747 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
HLCSP50747 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC14.37□□□□□ -0.11
HLCSP50747 NOP2-220ENST00000545915 630 ntTSL 2 BASIC14.37□□□□□ -0.11
HLCSP50747 AC120045.2-201ENST00000567334 178 ntBASIC14.37□□□□□ -0.11
HLCSP50747 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
HLCSP50747 APOC4-201ENST00000591600 348 ntTSL 3 BASIC14.37□□□□□ -0.11
HLCSP50747 AC010319.3-201ENST00000597028 470 ntBASIC14.37□□□□□ -0.11
HLCSP50747 AL359881.2-201ENST00000602973 570 ntBASIC14.37□□□□□ -0.11
HLCSP50747 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC14.37□□□□□ -0.11
HLCSP50747 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC14.37□□□□□ -0.11
HLCSP50747 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC14.37□□□□□ -0.11
HLCSP50747 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
HLCSP50747 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC14.37□□□□□ -0.11
HLCSP50747 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC14.37□□□□□ -0.11
HLCSP50747 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
HLCSP50747 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
HLCSP50747 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
HLCSP50747 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC14.37□□□□□ -0.11
HLCSP50747 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms