Protein–RNA interactions for Protein: P50213

IDH3A, Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3AP50213 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC14.58□□□□□ -0.08
IDH3AP50213 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
IDH3AP50213 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
IDH3AP50213 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
IDH3AP50213 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
IDH3AP50213 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC14.58□□□□□ -0.08
IDH3AP50213 SPDYE7P-202ENST00000420373 878 ntBASIC14.58□□□□□ -0.08
IDH3AP50213 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC14.58□□□□□ -0.08
IDH3AP50213 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
IDH3AP50213 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
IDH3AP50213 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC14.58□□□□□ -0.08
IDH3AP50213 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC14.58□□□□□ -0.08
IDH3AP50213 CCND1-203ENST00000536559 553 ntTSL 3 BASIC14.58□□□□□ -0.08
IDH3AP50213 AC124312.2-201ENST00000546615 427 ntTSL 3 BASIC14.58□□□□□ -0.08
IDH3AP50213 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
IDH3AP50213 COQ4-205ENST00000609948 956 ntTSL 2 BASIC14.58□□□□□ -0.08
IDH3AP50213 TEX28P1-201ENST00000613479 1221 ntBASIC14.58□□□□□ -0.08
IDH3AP50213 TEX28P2-201ENST00000617764 1221 ntBASIC14.58□□□□□ -0.08
IDH3AP50213 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
IDH3AP50213 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
IDH3AP50213 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
IDH3AP50213 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC14.58□□□□□ -0.08
IDH3AP50213 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC14.58□□□□□ -0.08
IDH3AP50213 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
IDH3AP50213 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
IDH3AP50213 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
IDH3AP50213 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
IDH3AP50213 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC14.58□□□□□ -0.08
IDH3AP50213 GRAMD4P3-201ENST00000621665 1669 ntBASIC14.58□□□□□ -0.08
IDH3AP50213 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
IDH3AP50213 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
IDH3AP50213 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
IDH3AP50213 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
IDH3AP50213 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC14.58□□□□□ -0.08
IDH3AP50213 FAM90A12P-201ENST00000519497 2375 ntBASIC14.58□□□□□ -0.08
IDH3AP50213 FAM90A24P-201ENST00000520792 2369 ntBASIC14.58□□□□□ -0.08
IDH3AP50213 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
IDH3AP50213 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC14.57□□□□□ -0.08
IDH3AP50213 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
IDH3AP50213 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
IDH3AP50213 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
IDH3AP50213 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
IDH3AP50213 SUN1-204ENST00000403868 978 ntTSL 2 BASIC14.57□□□□□ -0.08
IDH3AP50213 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC14.57□□□□□ -0.08
IDH3AP50213 AL353779.1-201ENST00000434793 351 ntBASIC14.57□□□□□ -0.08
IDH3AP50213 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
IDH3AP50213 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC14.57□□□□□ -0.08
IDH3AP50213 RN7SL618P-201ENST00000477850 296 ntBASIC14.57□□□□□ -0.08
IDH3AP50213 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
IDH3AP50213 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC14.57□□□□□ -0.08
IDH3AP50213 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC14.57□□□□□ -0.08
IDH3AP50213 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC14.57□□□□□ -0.08
IDH3AP50213 RAPGEF3-218ENST00000548919 2776 ntTSL 2 BASIC14.57□□□□□ -0.08
IDH3AP50213 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
IDH3AP50213 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
IDH3AP50213 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
IDH3AP50213 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
IDH3AP50213 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
IDH3AP50213 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC14.57□□□□□ -0.08
IDH3AP50213 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
IDH3AP50213 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
IDH3AP50213 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
IDH3AP50213 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
IDH3AP50213 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
IDH3AP50213 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC14.57□□□□□ -0.08
IDH3AP50213 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
IDH3AP50213 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC14.57□□□□□ -0.08
IDH3AP50213 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
IDH3AP50213 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC14.57□□□□□ -0.08
IDH3AP50213 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
IDH3AP50213 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC14.57□□□□□ -0.08
IDH3AP50213 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
IDH3AP50213 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
IDH3AP50213 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
IDH3AP50213 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
IDH3AP50213 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
IDH3AP50213 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
IDH3AP50213 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC14.56□□□□□ -0.08
IDH3AP50213 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
IDH3AP50213 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
IDH3AP50213 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC14.56□□□□□ -0.08
IDH3AP50213 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC14.56□□□□□ -0.08
IDH3AP50213 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
IDH3AP50213 SRC-202ENST00000373558 4304 ntTSL 5 BASIC14.56□□□□□ -0.08
IDH3AP50213 ZNF609-202ENST00000416172 3863 ntTSL 2 BASIC14.56□□□□□ -0.08
IDH3AP50213 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC14.56□□□□□ -0.08
IDH3AP50213 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
IDH3AP50213 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
IDH3AP50213 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
IDH3AP50213 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
IDH3AP50213 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
IDH3AP50213 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC14.56□□□□□ -0.08
IDH3AP50213 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
IDH3AP50213 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC14.56□□□□□ -0.08
IDH3AP50213 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC14.56□□□□□ -0.08
IDH3AP50213 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
IDH3AP50213 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
IDH3AP50213 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
IDH3AP50213 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
IDH3AP50213 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC14.56□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 78.5 ms