Protein–RNA interactions for Protein: P48668

KRT6C, Keratin, type II cytoskeletal 6C, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6CP48668 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
KRT6CP48668 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
KRT6CP48668 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
KRT6CP48668 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
KRT6CP48668 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
KRT6CP48668 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
KRT6CP48668 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
KRT6CP48668 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
KRT6CP48668 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
KRT6CP48668 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC14.58□□□□□ -0.07
KRT6CP48668 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC14.58□□□□□ -0.07
KRT6CP48668 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.07
KRT6CP48668 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
KRT6CP48668 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
KRT6CP48668 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
KRT6CP48668 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
KRT6CP48668 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC14.58□□□□□ -0.08
KRT6CP48668 STK40-201ENST00000359297 4837 ntTSL 2 BASIC14.58□□□□□ -0.08
KRT6CP48668 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
KRT6CP48668 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC14.58□□□□□ -0.08
KRT6CP48668 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
KRT6CP48668 AMT-232ENST00000636199 1546 ntTSL 5 BASIC14.58□□□□□ -0.08
KRT6CP48668 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
KRT6CP48668 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
KRT6CP48668 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
KRT6CP48668 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
KRT6CP48668 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
KRT6CP48668 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
KRT6CP48668 METTL26-204ENST00000397665 558 ntTSL 2 BASIC14.58□□□□□ -0.08
KRT6CP48668 C1QBPP1-201ENST00000400117 770 ntBASIC14.58□□□□□ -0.08
KRT6CP48668 AL442647.2-201ENST00000429864 857 ntBASIC14.58□□□□□ -0.08
KRT6CP48668 GNAQP1-201ENST00000444815 1067 ntBASIC14.58□□□□□ -0.08
KRT6CP48668 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
KRT6CP48668 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
KRT6CP48668 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
KRT6CP48668 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
KRT6CP48668 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
KRT6CP48668 RFPL4AP1-201ENST00000530883 850 ntBASIC14.58□□□□□ -0.08
KRT6CP48668 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
KRT6CP48668 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC14.58□□□□□ -0.08
KRT6CP48668 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC14.58□□□□□ -0.08
KRT6CP48668 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
KRT6CP48668 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC14.58□□□□□ -0.08
KRT6CP48668 AC009118.2-201ENST00000613275 655 ntBASIC14.58□□□□□ -0.08
KRT6CP48668 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC14.58□□□□□ -0.08
KRT6CP48668 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
KRT6CP48668 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC14.58□□□□□ -0.08
KRT6CP48668 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
KRT6CP48668 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC14.58□□□□□ -0.08
KRT6CP48668 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
KRT6CP48668 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
KRT6CP48668 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
KRT6CP48668 TNN-203ENST00000622870 3719 ntTSL 5 BASIC14.58□□□□□ -0.08
KRT6CP48668 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
KRT6CP48668 SLC7A15P-201ENST00000424028 1363 ntBASIC14.58□□□□□ -0.08
KRT6CP48668 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
KRT6CP48668 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
KRT6CP48668 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
KRT6CP48668 KRT8P14-201ENST00000414254 1442 ntBASIC14.58□□□□□ -0.08
KRT6CP48668 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC14.58□□□□□ -0.08
KRT6CP48668 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC14.58□□□□□ -0.08
KRT6CP48668 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
KRT6CP48668 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
KRT6CP48668 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC14.57□□□□□ -0.08
KRT6CP48668 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
KRT6CP48668 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
KRT6CP48668 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
KRT6CP48668 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
KRT6CP48668 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
KRT6CP48668 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
KRT6CP48668 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
KRT6CP48668 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
KRT6CP48668 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
KRT6CP48668 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
KRT6CP48668 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
KRT6CP48668 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
KRT6CP48668 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
KRT6CP48668 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
KRT6CP48668 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
KRT6CP48668 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
KRT6CP48668 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC14.57□□□□□ -0.08
KRT6CP48668 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC14.57□□□□□ -0.08
KRT6CP48668 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
KRT6CP48668 TPT1P11-201ENST00000458482 498 ntBASIC14.57□□□□□ -0.08
KRT6CP48668 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
KRT6CP48668 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC14.57□□□□□ -0.08
KRT6CP48668 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC14.57□□□□□ -0.08
KRT6CP48668 INGX-202ENST00000489074 768 ntBASIC14.57□□□□□ -0.08
KRT6CP48668 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC14.57□□□□□ -0.08
KRT6CP48668 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC14.57□□□□□ -0.08
KRT6CP48668 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC14.57□□□□□ -0.08
KRT6CP48668 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC14.57□□□□□ -0.08
KRT6CP48668 NAA60-208ENST00000570819 833 ntTSL 2 BASIC14.57□□□□□ -0.08
KRT6CP48668 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC14.57□□□□□ -0.08
KRT6CP48668 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC14.57□□□□□ -0.08
KRT6CP48668 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC14.57□□□□□ -0.08
KRT6CP48668 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC14.57□□□□□ -0.08
KRT6CP48668 AC093726.1-201ENST00000608064 963 ntBASIC14.57□□□□□ -0.08
KRT6CP48668 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC14.57□□□□□ -0.08
KRT6CP48668 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC14.57□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms