Protein–RNA interactions for Protein: P48169

GABRA4, Gamma-aminobutyric acid receptor subunit alpha-4, humanhuman

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA4P48169 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
GABRA4P48169 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
GABRA4P48169 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC14.11□□□□□ -0.15
GABRA4P48169 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
GABRA4P48169 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
GABRA4P48169 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
GABRA4P48169 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
GABRA4P48169 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
GABRA4P48169 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
GABRA4P48169 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
GABRA4P48169 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
GABRA4P48169 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
GABRA4P48169 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC14.11□□□□□ -0.15
GABRA4P48169 CSH2-202ENST00000345366 598 ntTSL 5 BASIC14.11□□□□□ -0.15
GABRA4P48169 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
GABRA4P48169 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
GABRA4P48169 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC14.11□□□□□ -0.15
GABRA4P48169 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
GABRA4P48169 AKR7A2P1-201ENST00000460134 915 ntBASIC14.11□□□□□ -0.15
GABRA4P48169 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
GABRA4P48169 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC14.11□□□□□ -0.15
GABRA4P48169 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
GABRA4P48169 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
GABRA4P48169 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
GABRA4P48169 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC14.11□□□□□ -0.15
GABRA4P48169 AL139099.5-201ENST00000635274 300 ntBASIC14.11□□□□□ -0.15
GABRA4P48169 Z98259.2-201ENST00000641583 609 ntBASIC14.11□□□□□ -0.15
GABRA4P48169 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
GABRA4P48169 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC14.11□□□□□ -0.15
GABRA4P48169 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
GABRA4P48169 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
GABRA4P48169 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC14.11□□□□□ -0.15
GABRA4P48169 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
GABRA4P48169 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
GABRA4P48169 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC14.11□□□□□ -0.15
GABRA4P48169 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC14.11□□□□□ -0.15
GABRA4P48169 AC138028.6-201ENST00000616106 1482 ntBASIC14.11□□□□□ -0.15
GABRA4P48169 MRPL37P1-201ENST00000592451 1337 ntBASIC14.11□□□□□ -0.15
GABRA4P48169 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
GABRA4P48169 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
GABRA4P48169 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
GABRA4P48169 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
GABRA4P48169 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
GABRA4P48169 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
GABRA4P48169 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
GABRA4P48169 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC14.11□□□□□ -0.15
GABRA4P48169 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
GABRA4P48169 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
GABRA4P48169 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
GABRA4P48169 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
GABRA4P48169 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
GABRA4P48169 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
GABRA4P48169 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
GABRA4P48169 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC14.1□□□□□ -0.15
GABRA4P48169 POR-201ENST00000394893 2532 ntTSL 5 BASIC14.1□□□□□ -0.15
GABRA4P48169 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
GABRA4P48169 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
GABRA4P48169 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC14.1□□□□□ -0.15
GABRA4P48169 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
GABRA4P48169 AL590440.2-201ENST00000641973 1595 ntBASIC14.1□□□□□ -0.15
GABRA4P48169 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
GABRA4P48169 MARS-233ENST00000628866 2583 ntTSL 5 BASIC14.1□□□□□ -0.15
GABRA4P48169 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
GABRA4P48169 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
GABRA4P48169 AC016700.1-201ENST00000429424 312 ntBASIC14.1□□□□□ -0.15
GABRA4P48169 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC14.1□□□□□ -0.15
GABRA4P48169 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC14.1□□□□□ -0.15
GABRA4P48169 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC14.1□□□□□ -0.15
GABRA4P48169 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC14.1□□□□□ -0.15
GABRA4P48169 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC14.1□□□□□ -0.15
GABRA4P48169 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC14.1□□□□□ -0.15
GABRA4P48169 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC14.1□□□□□ -0.15
GABRA4P48169 AC027601.3-201ENST00000622907 509 ntBASIC14.1□□□□□ -0.15
GABRA4P48169 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
GABRA4P48169 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
GABRA4P48169 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
GABRA4P48169 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
GABRA4P48169 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
GABRA4P48169 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
GABRA4P48169 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
GABRA4P48169 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
GABRA4P48169 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
GABRA4P48169 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
GABRA4P48169 AL133338.1-201ENST00000565695 1517 ntBASIC14.1□□□□□ -0.15
GABRA4P48169 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
GABRA4P48169 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
GABRA4P48169 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
GABRA4P48169 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
GABRA4P48169 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
GABRA4P48169 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
GABRA4P48169 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
GABRA4P48169 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
GABRA4P48169 GPI-205ENST00000586425 1799 ntTSL 5 BASIC14.09□□□□□ -0.15
GABRA4P48169 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
GABRA4P48169 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
GABRA4P48169 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
GABRA4P48169 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
GABRA4P48169 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
GABRA4P48169 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
GABRA4P48169 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 74.2 ms