Protein–RNA interactions for Protein: P46098

HTR3A, 5-hydroxytryptamine receptor 3A, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR3AP46098 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
HTR3AP46098 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
HTR3AP46098 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC13.91□□□□□ -0.18
HTR3AP46098 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
HTR3AP46098 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
HTR3AP46098 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC13.91□□□□□ -0.18
HTR3AP46098 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC13.91□□□□□ -0.18
HTR3AP46098 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC13.91□□□□□ -0.18
HTR3AP46098 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC13.91□□□□□ -0.18
HTR3AP46098 PCDHGB8P-201ENST00000502926 1973 ntBASIC13.91□□□□□ -0.18
HTR3AP46098 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
HTR3AP46098 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
HTR3AP46098 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC13.91□□□□□ -0.18
HTR3AP46098 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC13.91□□□□□ -0.18
HTR3AP46098 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
HTR3AP46098 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC13.91□□□□□ -0.18
HTR3AP46098 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
HTR3AP46098 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
HTR3AP46098 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
HTR3AP46098 TEX30-203ENST00000376022 828 ntTSL 2 BASIC13.91□□□□□ -0.18
HTR3AP46098 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
HTR3AP46098 C1QBPP1-201ENST00000400117 770 ntBASIC13.91□□□□□ -0.18
HTR3AP46098 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC13.91□□□□□ -0.18
HTR3AP46098 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC13.91□□□□□ -0.18
HTR3AP46098 MYCLP2-201ENST00000449268 967 ntBASIC13.91□□□□□ -0.18
HTR3AP46098 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC13.91□□□□□ -0.18
HTR3AP46098 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC13.91□□□□□ -0.18
HTR3AP46098 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC13.91□□□□□ -0.18
HTR3AP46098 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
HTR3AP46098 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC13.91□□□□□ -0.18
HTR3AP46098 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC13.91□□□□□ -0.18
HTR3AP46098 AC133539.2-201ENST00000604757 467 ntBASIC13.91□□□□□ -0.18
HTR3AP46098 BX539320.1-201ENST00000623759 877 ntBASIC13.91□□□□□ -0.18
HTR3AP46098 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
HTR3AP46098 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
HTR3AP46098 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
HTR3AP46098 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
HTR3AP46098 AP000845.1-201ENST00000581677 2131 ntBASIC13.91□□□□□ -0.18
HTR3AP46098 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
HTR3AP46098 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
HTR3AP46098 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
HTR3AP46098 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
HTR3AP46098 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC13.91□□□□□ -0.18
HTR3AP46098 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC13.91□□□□□ -0.18
HTR3AP46098 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
HTR3AP46098 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
HTR3AP46098 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
HTR3AP46098 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC13.9□□□□□ -0.18
HTR3AP46098 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
HTR3AP46098 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
HTR3AP46098 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
HTR3AP46098 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
HTR3AP46098 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
HTR3AP46098 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
HTR3AP46098 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC13.9□□□□□ -0.18
HTR3AP46098 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
HTR3AP46098 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC13.9□□□□□ -0.18
HTR3AP46098 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
HTR3AP46098 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
HTR3AP46098 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
HTR3AP46098 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
HTR3AP46098 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
HTR3AP46098 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
HTR3AP46098 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
HTR3AP46098 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
HTR3AP46098 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
HTR3AP46098 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
HTR3AP46098 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
HTR3AP46098 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
HTR3AP46098 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
HTR3AP46098 AC236430.1-201ENST00000402231 743 ntBASIC13.9□□□□□ -0.18
HTR3AP46098 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC13.9□□□□□ -0.18
HTR3AP46098 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC13.9□□□□□ -0.18
HTR3AP46098 ENPP7P5-201ENST00000541031 1031 ntBASIC13.9□□□□□ -0.18
HTR3AP46098 CDK4-206ENST00000549606 558 ntTSL 2 BASIC13.9□□□□□ -0.18
HTR3AP46098 COQ6-210ENST00000554920 649 ntTSL 3 BASIC13.9□□□□□ -0.18
HTR3AP46098 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC13.9□□□□□ -0.18
HTR3AP46098 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
HTR3AP46098 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC13.9□□□□□ -0.18
HTR3AP46098 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC13.9□□□□□ -0.18
HTR3AP46098 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC13.9□□□□□ -0.18
HTR3AP46098 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
HTR3AP46098 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC13.9□□□□□ -0.18
HTR3AP46098 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
HTR3AP46098 RUFY1-202ENST00000393438 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
HTR3AP46098 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
HTR3AP46098 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
HTR3AP46098 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
HTR3AP46098 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
HTR3AP46098 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
HTR3AP46098 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
HTR3AP46098 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
HTR3AP46098 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC13.9□□□□□ -0.18
HTR3AP46098 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC13.9□□□□□ -0.18
HTR3AP46098 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
HTR3AP46098 AL359881.3-201ENST00000602640 1721 ntBASIC13.9□□□□□ -0.18
HTR3AP46098 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
HTR3AP46098 AL360270.3-201ENST00000609118 1348 ntBASIC13.9□□□□□ -0.19
HTR3AP46098 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
HTR3AP46098 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC13.89□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms