Protein–RNA interactions for Protein: P36406

TRIM23, E3 ubiquitin-protein ligase TRIM23, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23P36406 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRIM23P36406 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TRIM23P36406 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRIM23P36406 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRIM23P36406 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRIM23P36406 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TRIM23P36406 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRIM23P36406 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TRIM23P36406 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRIM23P36406 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC14.68□□□□□ -0.06
TRIM23P36406 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC14.68□□□□□ -0.06
TRIM23P36406 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRIM23P36406 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC14.68□□□□□ -0.06
TRIM23P36406 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRIM23P36406 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC14.68□□□□□ -0.06
TRIM23P36406 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRIM23P36406 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRIM23P36406 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRIM23P36406 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRIM23P36406 E2F3P2-201ENST00000447755 1422 ntBASIC14.68□□□□□ -0.06
TRIM23P36406 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRIM23P36406 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRIM23P36406 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRIM23P36406 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TRIM23P36406 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TRIM23P36406 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRIM23P36406 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
TRIM23P36406 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
TRIM23P36406 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC14.68□□□□□ -0.06
TRIM23P36406 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC14.68□□□□□ -0.06
TRIM23P36406 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC14.68□□□□□ -0.06
TRIM23P36406 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC14.68□□□□□ -0.06
TRIM23P36406 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
TRIM23P36406 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TRIM23P36406 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
TRIM23P36406 HNRNPA1P32-201ENST00000396326 963 ntBASIC14.68□□□□□ -0.06
TRIM23P36406 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC14.68□□□□□ -0.06
TRIM23P36406 PUDPP3-201ENST00000445368 636 ntBASIC14.68□□□□□ -0.06
TRIM23P36406 BX284668.4-201ENST00000453917 508 ntBASIC14.68□□□□□ -0.06
TRIM23P36406 AKR7A2P1-201ENST00000460134 915 ntBASIC14.68□□□□□ -0.06
TRIM23P36406 ARTN-209ENST00000479128 471 ntTSL 3 BASIC14.68□□□□□ -0.06
TRIM23P36406 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
TRIM23P36406 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC14.68□□□□□ -0.06
TRIM23P36406 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TRIM23P36406 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TRIM23P36406 AC132192.2-201ENST00000596206 1147 ntBASIC14.68□□□□□ -0.06
TRIM23P36406 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRIM23P36406 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC14.68□□□□□ -0.06
TRIM23P36406 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
TRIM23P36406 MECR-202ENST00000373791 2416 ntTSL 2 BASIC14.68□□□□□ -0.06
TRIM23P36406 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
TRIM23P36406 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC14.68□□□□□ -0.06
TRIM23P36406 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
TRIM23P36406 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC14.68□□□□□ -0.06
TRIM23P36406 API5-203ENST00000455725 2257 ntTSL 2 BASIC14.68□□□□□ -0.06
TRIM23P36406 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
TRIM23P36406 AC138028.6-201ENST00000616106 1482 ntBASIC14.68□□□□□ -0.06
TRIM23P36406 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRIM23P36406 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
TRIM23P36406 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC14.68□□□□□ -0.06
TRIM23P36406 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRIM23P36406 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRIM23P36406 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC14.68□□□□□ -0.06
TRIM23P36406 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TRIM23P36406 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRIM23P36406 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
TRIM23P36406 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
TRIM23P36406 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRIM23P36406 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRIM23P36406 AL133338.1-201ENST00000565695 1517 ntBASIC14.67□□□□□ -0.06
TRIM23P36406 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
TRIM23P36406 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRIM23P36406 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
TRIM23P36406 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
TRIM23P36406 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRIM23P36406 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
TRIM23P36406 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRIM23P36406 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC14.67□□□□□ -0.06
TRIM23P36406 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
TRIM23P36406 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
TRIM23P36406 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC14.67□□□□□ -0.06
TRIM23P36406 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRIM23P36406 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRIM23P36406 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC14.67□□□□□ -0.06
TRIM23P36406 AC021723.1-201ENST00000486306 515 ntBASIC14.67□□□□□ -0.06
TRIM23P36406 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC14.67□□□□□ -0.06
TRIM23P36406 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
TRIM23P36406 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
TRIM23P36406 AC100827.2-201ENST00000563214 1194 ntBASIC14.67□□□□□ -0.06
TRIM23P36406 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
TRIM23P36406 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC14.67□□□□□ -0.06
TRIM23P36406 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC14.67□□□□□ -0.06
TRIM23P36406 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRIM23P36406 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRIM23P36406 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRIM23P36406 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC14.67□□□□□ -0.06
TRIM23P36406 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC14.67□□□□□ -0.06
TRIM23P36406 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
TRIM23P36406 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
TRIM23P36406 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 67.8 ms