Protein–RNA interactions for Protein: P29279

CTGF, Connective tissue growth factor, humanhuman

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTGFP29279 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
CTGFP29279 TEKT4P2-202ENST00000559466 1312 ntBASIC16.45■□□□□ 0.22
CTGFP29279 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
CTGFP29279 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CTGFP29279 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC16.44■□□□□ 0.22
CTGFP29279 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CTGFP29279 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CTGFP29279 AGGF1P1-201ENST00000509500 2073 ntBASIC16.44■□□□□ 0.22
CTGFP29279 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
CTGFP29279 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
CTGFP29279 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CTGFP29279 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC16.44■□□□□ 0.22
CTGFP29279 LILRA2-203ENST00000391737 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CTGFP29279 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
CTGFP29279 TNNI2-201ENST00000252898 678 ntAPPRIS P3 TSL 3 BASIC16.44■□□□□ 0.22
CTGFP29279 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CTGFP29279 CRHR1-205ENST00000352855 1146 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CTGFP29279 BCAS2-201ENST00000369541 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CTGFP29279 TNNI2-202ENST00000381905 706 ntAPPRIS ALT1 TSL 3 BASIC16.44■□□□□ 0.22
CTGFP29279 TNNI2-203ENST00000381906 745 ntAPPRIS P3 TSL 3 BASIC16.44■□□□□ 0.22
CTGFP29279 TNNI2-204ENST00000381911 743 ntAPPRIS P3 TSL 2 BASIC16.44■□□□□ 0.22
CTGFP29279 KRTAP2-2-201ENST00000398477 733 ntAPPRIS P2 BASIC16.44■□□□□ 0.22
CTGFP29279 GULP1-204ENST00000409637 1242 ntTSL 2 BASIC16.44■□□□□ 0.22
CTGFP29279 AC063952.3-201ENST00000467756 308 ntBASIC16.44■□□□□ 0.22
CTGFP29279 AC026470.1-201ENST00000478038 846 ntBASIC16.44■□□□□ 0.22
CTGFP29279 AC113391.2-201ENST00000512245 553 ntTSL 4 BASIC16.44■□□□□ 0.22
CTGFP29279 AC103808.3-201ENST00000579714 598 ntTSL 5 BASIC16.44■□□□□ 0.22
CTGFP29279 AP005264.6-204ENST00000588436 719 ntBASIC16.44■□□□□ 0.22
CTGFP29279 CYP4F36P-201ENST00000589193 186 ntBASIC16.44■□□□□ 0.22
CTGFP29279 RPS5-204ENST00000598098 536 ntTSL 2 BASIC16.44■□□□□ 0.22
CTGFP29279 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC16.44■□□□□ 0.22
CTGFP29279 FXYD3-204ENST00000603181 758 ntAPPRIS P1 TSL 3 BASIC16.44■□□□□ 0.22
CTGFP29279 AC010976.2-201ENST00000609697 852 ntBASIC16.44■□□□□ 0.22
CTGFP29279 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC16.44■□□□□ 0.22
CTGFP29279 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
CTGFP29279 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC16.44■□□□□ 0.22
CTGFP29279 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC16.44■□□□□ 0.22
CTGFP29279 ACE-204ENST00000428043 5120 ntTSL 2 BASIC16.44■□□□□ 0.22
CTGFP29279 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CTGFP29279 MRPL55-205ENST00000366731 1423 ntTSL 2 BASIC16.44■□□□□ 0.22
CTGFP29279 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CTGFP29279 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CTGFP29279 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC16.44■□□□□ 0.22
CTGFP29279 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
CTGFP29279 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC16.43■□□□□ 0.22
CTGFP29279 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC16.43■□□□□ 0.22
CTGFP29279 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC16.43■□□□□ 0.22
CTGFP29279 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CTGFP29279 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
CTGFP29279 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CTGFP29279 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC16.43■□□□□ 0.22
CTGFP29279 OPRM1-201ENST00000229768 1465 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CTGFP29279 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC16.43■□□□□ 0.22
CTGFP29279 OPRM1-207ENST00000428397 1481 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
CTGFP29279 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CTGFP29279 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CTGFP29279 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC16.43■□□□□ 0.22
CTGFP29279 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
CTGFP29279 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CTGFP29279 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CTGFP29279 AL391005.1-201ENST00000623953 2435 ntBASIC16.43■□□□□ 0.22
CTGFP29279 UPK1A-201ENST00000222275 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CTGFP29279 HIST1H1D-201ENST00000244534 666 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
CTGFP29279 MBD3L3-201ENST00000333843 775 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CTGFP29279 RNVU1-8-201ENST00000364272 125 ntBASIC16.43■□□□□ 0.22
CTGFP29279 UPK1A-202ENST00000379013 1016 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CTGFP29279 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC16.43■□□□□ 0.22
CTGFP29279 GAS5-209ENST00000430245 723 ntTSL 3 BASIC16.43■□□□□ 0.22
CTGFP29279 SCARNA12-201ENST00000459155 270 ntBASIC16.43■□□□□ 0.22
CTGFP29279 RN7SL564P-201ENST00000496309 250 ntBASIC16.43■□□□□ 0.22
CTGFP29279 FAM60A-207ENST00000542983 738 ntTSL 4 BASIC16.43■□□□□ 0.22
CTGFP29279 MCEMP1-202ENST00000597445 763 ntAPPRIS ALT2 TSL 3 BASIC16.43■□□□□ 0.22
CTGFP29279 AC006483.2-201ENST00000609813 515 ntBASIC16.43■□□□□ 0.22
CTGFP29279 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC16.43■□□□□ 0.22
CTGFP29279 MBD1-225ENST00000591535 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
CTGFP29279 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC16.43■□□□□ 0.22
CTGFP29279 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CTGFP29279 AC138761.4-201ENST00000578881 1514 ntTSL 3 BASIC16.43■□□□□ 0.22
CTGFP29279 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CTGFP29279 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
CTGFP29279 BABAM2-204ENST00000379624 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CTGFP29279 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC16.43■□□□□ 0.22
CTGFP29279 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CTGFP29279 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC16.43■□□□□ 0.22
CTGFP29279 PSTPIP1-207ENST00000559295 1349 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CTGFP29279 FXYD3-208ENST00000604404 1322 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CTGFP29279 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CTGFP29279 LINC00528-201ENST00000600723 2160 ntBASIC16.43■□□□□ 0.22
CTGFP29279 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CTGFP29279 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC16.42■□□□□ 0.22
CTGFP29279 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
CTGFP29279 AC092135.3-201ENST00000624151 1846 ntBASIC16.42■□□□□ 0.22
CTGFP29279 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CTGFP29279 SCAMP1-AS1-201ENST00000421004 1479 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CTGFP29279 AC004554.1-201ENST00000422830 1468 ntBASIC16.42■□□□□ 0.22
CTGFP29279 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC16.42■□□□□ 0.22
CTGFP29279 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CTGFP29279 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
CTGFP29279 AL591122.2-201ENST00000624125 1853 ntBASIC16.42■□□□□ 0.22
CTGFP29279 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 69 ms