Protein–RNA interactions for Protein: P18031

PTPN1, Tyrosine-protein phosphatase non-receptor type 1, humanhuman

Known RBP Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1P18031 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
PTPN1P18031 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
PTPN1P18031 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
PTPN1P18031 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PTPN1P18031 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC15.82■□□□□ 0.12
PTPN1P18031 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
PTPN1P18031 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
PTPN1P18031 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PTPN1P18031 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC15.82■□□□□ 0.12
PTPN1P18031 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
PTPN1P18031 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PTPN1P18031 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
PTPN1P18031 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
PTPN1P18031 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PTPN1P18031 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
PTPN1P18031 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC15.81■□□□□ 0.12
PTPN1P18031 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PTPN1P18031 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PTPN1P18031 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PTPN1P18031 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PTPN1P18031 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PTPN1P18031 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
PTPN1P18031 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PTPN1P18031 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
PTPN1P18031 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PTPN1P18031 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
PTPN1P18031 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
PTPN1P18031 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
PTPN1P18031 PFN1P12-201ENST00000455938 534 ntBASIC15.81■□□□□ 0.12
PTPN1P18031 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC15.81■□□□□ 0.12
PTPN1P18031 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC15.81■□□□□ 0.12
PTPN1P18031 AC108725.1-201ENST00000495472 409 ntBASIC15.81■□□□□ 0.12
PTPN1P18031 GCOM2-201ENST00000509133 1104 ntBASIC15.81■□□□□ 0.12
PTPN1P18031 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
PTPN1P18031 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC15.81■□□□□ 0.12
PTPN1P18031 C1R-202ENST00000536053 2347 ntTSL 2 BASIC15.81■□□□□ 0.12
PTPN1P18031 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC15.81■□□□□ 0.12
PTPN1P18031 VPS18-202ENST00000558474 873 ntTSL 3 BASIC15.81■□□□□ 0.12
PTPN1P18031 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
PTPN1P18031 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC15.81■□□□□ 0.12
PTPN1P18031 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC15.81■□□□□ 0.12
PTPN1P18031 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC15.81■□□□□ 0.12
PTPN1P18031 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC15.81■□□□□ 0.12
PTPN1P18031 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PTPN1P18031 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
PTPN1P18031 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
PTPN1P18031 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC15.81■□□□□ 0.12
PTPN1P18031 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
PTPN1P18031 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC15.81■□□□□ 0.12
PTPN1P18031 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PTPN1P18031 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
PTPN1P18031 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
PTPN1P18031 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
PTPN1P18031 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PTPN1P18031 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
PTPN1P18031 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
PTPN1P18031 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
PTPN1P18031 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
PTPN1P18031 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC15.8■□□□□ 0.12
PTPN1P18031 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC15.8■□□□□ 0.12
PTPN1P18031 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
PTPN1P18031 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PTPN1P18031 AC007292.2-201ENST00000593524 1812 ntBASIC15.8■□□□□ 0.12
PTPN1P18031 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC15.8■□□□□ 0.12
PTPN1P18031 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC15.8■□□□□ 0.12
PTPN1P18031 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PTPN1P18031 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PTPN1P18031 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC15.8■□□□□ 0.12
PTPN1P18031 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PTPN1P18031 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC15.8■□□□□ 0.12
PTPN1P18031 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC15.8■□□□□ 0.12
PTPN1P18031 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PTPN1P18031 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PTPN1P18031 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
PTPN1P18031 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PTPN1P18031 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PTPN1P18031 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
PTPN1P18031 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PTPN1P18031 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC15.8■□□□□ 0.12
PTPN1P18031 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC15.8■□□□□ 0.12
PTPN1P18031 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC15.8■□□□□ 0.12
PTPN1P18031 HSPB1P2-201ENST00000448722 546 ntBASIC15.8■□□□□ 0.12
PTPN1P18031 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC15.8■□□□□ 0.12
PTPN1P18031 USB1-203ENST00000539737 1212 ntTSL 2 BASIC15.8■□□□□ 0.12
PTPN1P18031 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC15.8■□□□□ 0.12
PTPN1P18031 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC15.8■□□□□ 0.12
PTPN1P18031 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC15.8■□□□□ 0.12
PTPN1P18031 PRKN-211ENST00000615065 261 ntTSL 5 BASIC15.8■□□□□ 0.12
PTPN1P18031 AL096828.3-201ENST00000615354 462 ntBASIC15.8■□□□□ 0.12
PTPN1P18031 MIR6869-201ENST00000619434 62 ntBASIC15.8■□□□□ 0.12
PTPN1P18031 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PTPN1P18031 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC15.8■□□□□ 0.12
PTPN1P18031 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PTPN1P18031 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PTPN1P18031 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
PTPN1P18031 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
PTPN1P18031 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC15.8■□□□□ 0.12
PTPN1P18031 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PTPN1P18031 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
PTPN1P18031 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 56.1 ms