Protein–RNA interactions for Protein: P16402

HIST1H1D, Histone H1.3, humanhuman

Known RBP Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1DP16402 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
HIST1H1DP16402 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
HIST1H1DP16402 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
HIST1H1DP16402 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
HIST1H1DP16402 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
HIST1H1DP16402 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
HIST1H1DP16402 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC12.74□□□□□ -0.37
HIST1H1DP16402 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
HIST1H1DP16402 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC12.74□□□□□ -0.37
HIST1H1DP16402 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
HIST1H1DP16402 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
HIST1H1DP16402 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
HIST1H1DP16402 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
HIST1H1DP16402 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
HIST1H1DP16402 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
HIST1H1DP16402 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
HIST1H1DP16402 TCAM1P-207ENST00000485295 1537 ntBASIC12.73□□□□□ -0.37
HIST1H1DP16402 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC12.73□□□□□ -0.37
HIST1H1DP16402 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
HIST1H1DP16402 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
HIST1H1DP16402 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC12.73□□□□□ -0.37
HIST1H1DP16402 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
HIST1H1DP16402 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
HIST1H1DP16402 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
HIST1H1DP16402 KRT8P14-201ENST00000414254 1442 ntBASIC12.73□□□□□ -0.37
HIST1H1DP16402 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
HIST1H1DP16402 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
HIST1H1DP16402 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
HIST1H1DP16402 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
HIST1H1DP16402 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
HIST1H1DP16402 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
HIST1H1DP16402 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
HIST1H1DP16402 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC12.73□□□□□ -0.37
HIST1H1DP16402 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
HIST1H1DP16402 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC12.73□□□□□ -0.37
HIST1H1DP16402 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
HIST1H1DP16402 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
HIST1H1DP16402 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
HIST1H1DP16402 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
HIST1H1DP16402 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
HIST1H1DP16402 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC12.73□□□□□ -0.37
HIST1H1DP16402 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
HIST1H1DP16402 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC12.73□□□□□ -0.37
HIST1H1DP16402 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC12.73□□□□□ -0.37
HIST1H1DP16402 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC12.73□□□□□ -0.37
HIST1H1DP16402 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
HIST1H1DP16402 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC12.73□□□□□ -0.37
HIST1H1DP16402 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
HIST1H1DP16402 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC12.73□□□□□ -0.37
HIST1H1DP16402 5S_rRNA.22-201ENST00000614916 106 ntBASIC12.73□□□□□ -0.37
HIST1H1DP16402 AL158212.4-201ENST00000624062 1286 ntBASIC12.73□□□□□ -0.37
HIST1H1DP16402 AC073592.8-201ENST00000624126 511 ntBASIC12.73□□□□□ -0.37
HIST1H1DP16402 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
HIST1H1DP16402 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
HIST1H1DP16402 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
HIST1H1DP16402 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC12.73□□□□□ -0.37
HIST1H1DP16402 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC12.73□□□□□ -0.37
HIST1H1DP16402 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
HIST1H1DP16402 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
HIST1H1DP16402 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
HIST1H1DP16402 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC12.73□□□□□ -0.37
HIST1H1DP16402 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC12.73□□□□□ -0.37
HIST1H1DP16402 AC012617.1-204ENST00000586340 2305 ntBASIC12.73□□□□□ -0.37
HIST1H1DP16402 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
HIST1H1DP16402 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
HIST1H1DP16402 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
HIST1H1DP16402 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
HIST1H1DP16402 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
HIST1H1DP16402 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
HIST1H1DP16402 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
HIST1H1DP16402 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC12.73□□□□□ -0.37
HIST1H1DP16402 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
HIST1H1DP16402 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC12.73□□□□□ -0.37
HIST1H1DP16402 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
HIST1H1DP16402 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
HIST1H1DP16402 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
HIST1H1DP16402 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC12.72□□□□□ -0.37
HIST1H1DP16402 AC020910.6-201ENST00000623084 1459 ntBASIC12.72□□□□□ -0.37
HIST1H1DP16402 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
HIST1H1DP16402 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC12.72□□□□□ -0.37
HIST1H1DP16402 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
HIST1H1DP16402 CICP17-201ENST00000418553 2377 ntBASIC12.72□□□□□ -0.37
HIST1H1DP16402 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
HIST1H1DP16402 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
HIST1H1DP16402 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
HIST1H1DP16402 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC12.72□□□□□ -0.37
HIST1H1DP16402 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC12.72□□□□□ -0.37
HIST1H1DP16402 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC12.72□□□□□ -0.37
HIST1H1DP16402 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
HIST1H1DP16402 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
HIST1H1DP16402 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
HIST1H1DP16402 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
HIST1H1DP16402 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
HIST1H1DP16402 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
HIST1H1DP16402 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
HIST1H1DP16402 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC12.72□□□□□ -0.37
HIST1H1DP16402 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
HIST1H1DP16402 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
HIST1H1DP16402 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
HIST1H1DP16402 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms