Protein–RNA interactions for Protein: P0CG21

NHLRC4, NHL-repeat-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC4P0CG21 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
NHLRC4P0CG21 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC11.09□□□□□ -0.63
NHLRC4P0CG21 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
NHLRC4P0CG21 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
NHLRC4P0CG21 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC11.09□□□□□ -0.63
NHLRC4P0CG21 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC11.09□□□□□ -0.63
NHLRC4P0CG21 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC11.09□□□□□ -0.63
NHLRC4P0CG21 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC11.09□□□□□ -0.63
NHLRC4P0CG21 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
NHLRC4P0CG21 AC008132.1-202ENST00000342005 1389 ntBASIC11.09□□□□□ -0.63
NHLRC4P0CG21 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
NHLRC4P0CG21 MRPS22-201ENST00000310776 1120 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
NHLRC4P0CG21 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
NHLRC4P0CG21 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
NHLRC4P0CG21 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
NHLRC4P0CG21 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
NHLRC4P0CG21 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
NHLRC4P0CG21 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
NHLRC4P0CG21 AC007952.2-201ENST00000399091 1176 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
NHLRC4P0CG21 AL136309.1-201ENST00000403917 691 ntBASIC11.09□□□□□ -0.63
NHLRC4P0CG21 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC11.09□□□□□ -0.63
NHLRC4P0CG21 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC11.09□□□□□ -0.63
NHLRC4P0CG21 MCPH1-AS1-203ENST00000525186 869 ntTSL 3 BASIC11.09□□□□□ -0.63
NHLRC4P0CG21 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC11.09□□□□□ -0.63
NHLRC4P0CG21 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC11.09□□□□□ -0.63
NHLRC4P0CG21 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC11.09□□□□□ -0.63
NHLRC4P0CG21 AC020763.1-201ENST00000567186 551 ntTSL 4 BASIC11.09□□□□□ -0.63
NHLRC4P0CG21 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC11.09□□□□□ -0.63
NHLRC4P0CG21 LINC01229-204ENST00000568751 720 ntTSL 3 BASIC11.09□□□□□ -0.63
NHLRC4P0CG21 TPGS2-209ENST00000589049 1102 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
NHLRC4P0CG21 UBL5-208ENST00000593087 320 ntTSL 3 BASIC11.09□□□□□ -0.63
NHLRC4P0CG21 HLA-C-210ENST00000640219 976 ntBASIC11.09□□□□□ -0.63
NHLRC4P0CG21 AC004923.1-202ENST00000642106 209 ntBASIC11.09□□□□□ -0.63
NHLRC4P0CG21 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
NHLRC4P0CG21 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
NHLRC4P0CG21 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC11.09□□□□□ -0.63
NHLRC4P0CG21 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
NHLRC4P0CG21 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC11.09□□□□□ -0.63
NHLRC4P0CG21 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
NHLRC4P0CG21 ACE-203ENST00000413513 2237 ntTSL 2 BASIC11.09□□□□□ -0.63
NHLRC4P0CG21 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
NHLRC4P0CG21 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC11.09□□□□□ -0.63
NHLRC4P0CG21 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC11.09□□□□□ -0.63
NHLRC4P0CG21 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC11.09□□□□□ -0.63
NHLRC4P0CG21 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC11.09□□□□□ -0.63
NHLRC4P0CG21 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC11.09□□□□□ -0.63
NHLRC4P0CG21 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
NHLRC4P0CG21 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
NHLRC4P0CG21 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
NHLRC4P0CG21 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
NHLRC4P0CG21 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
NHLRC4P0CG21 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
NHLRC4P0CG21 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
NHLRC4P0CG21 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.63
NHLRC4P0CG21 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC11.08□□□□□ -0.63
NHLRC4P0CG21 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
NHLRC4P0CG21 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
NHLRC4P0CG21 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
NHLRC4P0CG21 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
NHLRC4P0CG21 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
NHLRC4P0CG21 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
NHLRC4P0CG21 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
NHLRC4P0CG21 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC11.08□□□□□ -0.64
NHLRC4P0CG21 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
NHLRC4P0CG21 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
NHLRC4P0CG21 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
NHLRC4P0CG21 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
NHLRC4P0CG21 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
NHLRC4P0CG21 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
NHLRC4P0CG21 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
NHLRC4P0CG21 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC11.08□□□□□ -0.64
NHLRC4P0CG21 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
NHLRC4P0CG21 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC11.08□□□□□ -0.64
NHLRC4P0CG21 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
NHLRC4P0CG21 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC11.08□□□□□ -0.64
NHLRC4P0CG21 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
NHLRC4P0CG21 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
NHLRC4P0CG21 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
NHLRC4P0CG21 AC091046.1-201ENST00000331871 207 ntBASIC11.08□□□□□ -0.64
NHLRC4P0CG21 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
NHLRC4P0CG21 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC11.08□□□□□ -0.64
NHLRC4P0CG21 RGS5-214ENST00000429865 754 ntTSL 3 BASIC11.08□□□□□ -0.64
NHLRC4P0CG21 NOC2LP1-201ENST00000450578 752 ntBASIC11.08□□□□□ -0.64
NHLRC4P0CG21 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC11.08□□□□□ -0.64
NHLRC4P0CG21 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC11.08□□□□□ -0.64
NHLRC4P0CG21 AC022616.1-201ENST00000518688 554 ntBASIC11.08□□□□□ -0.64
NHLRC4P0CG21 LY6E-208ENST00000520531 490 ntTSL 2 BASIC11.08□□□□□ -0.64
NHLRC4P0CG21 AC073573.1-201ENST00000550908 481 ntTSL 3 BASIC11.08□□□□□ -0.64
NHLRC4P0CG21 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC11.08□□□□□ -0.64
NHLRC4P0CG21 C19orf25-205ENST00000588427 853 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
NHLRC4P0CG21 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC11.08□□□□□ -0.64
NHLRC4P0CG21 OR10B1P-201ENST00000601666 907 ntBASIC11.08□□□□□ -0.64
NHLRC4P0CG21 AL353770.1-201ENST00000614915 403 ntBASIC11.08□□□□□ -0.64
NHLRC4P0CG21 AP001002.3-201ENST00000623482 206 ntBASIC11.08□□□□□ -0.64
NHLRC4P0CG21 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
NHLRC4P0CG21 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
NHLRC4P0CG21 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
NHLRC4P0CG21 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
NHLRC4P0CG21 LINC00528-201ENST00000600723 2160 ntBASIC11.08□□□□□ -0.64
NHLRC4P0CG21 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms