Protein–RNA interactions for Protein: P03897

MT-ND3, NADH-ubiquinone oxidoreductase chain 3, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND3P03897 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
MT-ND3P03897 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC15.35■□□□□ 0.05
MT-ND3P03897 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC15.35■□□□□ 0.05
MT-ND3P03897 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
MT-ND3P03897 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
MT-ND3P03897 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
MT-ND3P03897 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
MT-ND3P03897 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
MT-ND3P03897 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
MT-ND3P03897 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
MT-ND3P03897 LILRP1-201ENST00000444199 1370 ntBASIC15.35■□□□□ 0.05
MT-ND3P03897 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
MT-ND3P03897 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC15.34■□□□□ 0.05
MT-ND3P03897 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
MT-ND3P03897 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
MT-ND3P03897 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
MT-ND3P03897 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC15.34■□□□□ 0.05
MT-ND3P03897 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
MT-ND3P03897 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
MT-ND3P03897 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
MT-ND3P03897 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
MT-ND3P03897 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC15.34■□□□□ 0.05
MT-ND3P03897 AC092135.3-201ENST00000624151 1846 ntBASIC15.34■□□□□ 0.05
MT-ND3P03897 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
MT-ND3P03897 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC15.34■□□□□ 0.05
MT-ND3P03897 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
MT-ND3P03897 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
MT-ND3P03897 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
MT-ND3P03897 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
MT-ND3P03897 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
MT-ND3P03897 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
MT-ND3P03897 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
MT-ND3P03897 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC15.34■□□□□ 0.05
MT-ND3P03897 AC098614.1-201ENST00000368528 745 ntBASIC15.34■□□□□ 0.05
MT-ND3P03897 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
MT-ND3P03897 AC093004.1-201ENST00000508850 424 ntBASIC15.34■□□□□ 0.05
MT-ND3P03897 SDHAP3-202ENST00000515467 728 ntBASIC15.34■□□□□ 0.05
MT-ND3P03897 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC15.34■□□□□ 0.05
MT-ND3P03897 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC15.34■□□□□ 0.05
MT-ND3P03897 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC15.34■□□□□ 0.05
MT-ND3P03897 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
MT-ND3P03897 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
MT-ND3P03897 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC15.34■□□□□ 0.05
MT-ND3P03897 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
MT-ND3P03897 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC15.34■□□□□ 0.05
MT-ND3P03897 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC15.34■□□□□ 0.05
MT-ND3P03897 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
MT-ND3P03897 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
MT-ND3P03897 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
MT-ND3P03897 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC15.34■□□□□ 0.05
MT-ND3P03897 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
MT-ND3P03897 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC15.33■□□□□ 0.05
MT-ND3P03897 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
MT-ND3P03897 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC15.33■□□□□ 0.05
MT-ND3P03897 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
MT-ND3P03897 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.05
MT-ND3P03897 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
MT-ND3P03897 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
MT-ND3P03897 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
MT-ND3P03897 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC15.33■□□□□ 0.04
MT-ND3P03897 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
MT-ND3P03897 Z97205.2-201ENST00000564697 1639 ntBASIC15.33■□□□□ 0.04
MT-ND3P03897 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
MT-ND3P03897 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
MT-ND3P03897 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
MT-ND3P03897 GSAP-205ENST00000430584 600 ntTSL 5 BASIC15.33■□□□□ 0.04
MT-ND3P03897 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC15.33■□□□□ 0.04
MT-ND3P03897 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
MT-ND3P03897 AC010336.2-201ENST00000564226 506 ntBASIC15.33■□□□□ 0.04
MT-ND3P03897 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC15.33■□□□□ 0.04
MT-ND3P03897 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC15.33■□□□□ 0.04
MT-ND3P03897 AC004840.1-201ENST00000636359 365 ntBASIC15.33■□□□□ 0.04
MT-ND3P03897 AL033527.5-202ENST00000641632 1098 ntBASIC15.33■□□□□ 0.04
MT-ND3P03897 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
MT-ND3P03897 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
MT-ND3P03897 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC15.33■□□□□ 0.04
MT-ND3P03897 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
MT-ND3P03897 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
MT-ND3P03897 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
MT-ND3P03897 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
MT-ND3P03897 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
MT-ND3P03897 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC15.33■□□□□ 0.04
MT-ND3P03897 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
MT-ND3P03897 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
MT-ND3P03897 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
MT-ND3P03897 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC15.33■□□□□ 0.04
MT-ND3P03897 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
MT-ND3P03897 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
MT-ND3P03897 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
MT-ND3P03897 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
MT-ND3P03897 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
MT-ND3P03897 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC15.33■□□□□ 0.04
MT-ND3P03897 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
MT-ND3P03897 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
MT-ND3P03897 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC15.32■□□□□ 0.04
MT-ND3P03897 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
MT-ND3P03897 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
MT-ND3P03897 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
MT-ND3P03897 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
MT-ND3P03897 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms