Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC14.2□□□□□ -0.14
MT-ND1P03886 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
MT-ND1P03886 AC004899.2-201ENST00000622993 3860 ntBASIC14.2□□□□□ -0.14
MT-ND1P03886 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
MT-ND1P03886 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC14.2□□□□□ -0.14
MT-ND1P03886 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
MT-ND1P03886 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC14.2□□□□□ -0.14
MT-ND1P03886 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
MT-ND1P03886 VWA8-201ENST00000281496 3475 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
MT-ND1P03886 HSPH1-202ENST00000380405 3480 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
MT-ND1P03886 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC14.2□□□□□ -0.14
MT-ND1P03886 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
MT-ND1P03886 PPP1R3D-201ENST00000370996 3630 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
MT-ND1P03886 ALOX15B-201ENST00000380173 2605 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
MT-ND1P03886 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
MT-ND1P03886 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
MT-ND1P03886 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC14.2□□□□□ -0.14
MT-ND1P03886 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC14.2□□□□□ -0.14
MT-ND1P03886 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
MT-ND1P03886 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC14.2□□□□□ -0.14
MT-ND1P03886 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
MT-ND1P03886 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
MT-ND1P03886 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC14.2□□□□□ -0.14
MT-ND1P03886 AL133267.1-201ENST00000398220 340 ntBASIC14.2□□□□□ -0.14
MT-ND1P03886 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC14.2□□□□□ -0.14
MT-ND1P03886 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC14.2□□□□□ -0.14
MT-ND1P03886 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC14.2□□□□□ -0.14
MT-ND1P03886 AL589739.1-201ENST00000607720 493 ntBASIC14.2□□□□□ -0.14
MT-ND1P03886 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
MT-ND1P03886 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
MT-ND1P03886 NLRP2B-201ENST00000434992 3194 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
MT-ND1P03886 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
MT-ND1P03886 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
MT-ND1P03886 PPT1-213ENST00000641319 2388 ntBASIC14.2□□□□□ -0.14
MT-ND1P03886 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC14.2□□□□□ -0.14
MT-ND1P03886 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
MT-ND1P03886 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
MT-ND1P03886 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
MT-ND1P03886 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC14.2□□□□□ -0.14
MT-ND1P03886 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC14.2□□□□□ -0.14
MT-ND1P03886 CETN4P-206ENST00000642099 2168 ntBASIC14.2□□□□□ -0.14
MT-ND1P03886 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
MT-ND1P03886 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
MT-ND1P03886 GOLGA6L17P-202ENST00000614358 1398 ntBASIC14.2□□□□□ -0.14
MT-ND1P03886 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
MT-ND1P03886 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
MT-ND1P03886 AC016397.2-201ENST00000624848 1985 ntBASIC14.2□□□□□ -0.14
MT-ND1P03886 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC14.2□□□□□ -0.14
MT-ND1P03886 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
MT-ND1P03886 FAM155B-201ENST00000252338 4013 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
MT-ND1P03886 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
MT-ND1P03886 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC14.19□□□□□ -0.14
MT-ND1P03886 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
MT-ND1P03886 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
MT-ND1P03886 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
MT-ND1P03886 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC14.19□□□□□ -0.14
MT-ND1P03886 BCKDHB-201ENST00000320393 3692 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
MT-ND1P03886 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
MT-ND1P03886 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
MT-ND1P03886 AC019294.4-201ENST00000561777 2905 ntBASIC14.19□□□□□ -0.14
MT-ND1P03886 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
MT-ND1P03886 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
MT-ND1P03886 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
MT-ND1P03886 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
MT-ND1P03886 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
MT-ND1P03886 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
MT-ND1P03886 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
MT-ND1P03886 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
MT-ND1P03886 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
MT-ND1P03886 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
MT-ND1P03886 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
MT-ND1P03886 SERBP1P3-201ENST00000459980 809 ntBASIC14.19□□□□□ -0.14
MT-ND1P03886 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
MT-ND1P03886 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC14.19□□□□□ -0.14
MT-ND1P03886 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC14.19□□□□□ -0.14
MT-ND1P03886 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC14.19□□□□□ -0.14
MT-ND1P03886 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
MT-ND1P03886 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC14.19□□□□□ -0.14
MT-ND1P03886 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
MT-ND1P03886 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
MT-ND1P03886 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
MT-ND1P03886 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC14.19□□□□□ -0.14
MT-ND1P03886 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
MT-ND1P03886 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC14.19□□□□□ -0.14
MT-ND1P03886 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
MT-ND1P03886 PSIP1-203ENST00000380733 3391 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
MT-ND1P03886 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
MT-ND1P03886 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
MT-ND1P03886 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
MT-ND1P03886 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
MT-ND1P03886 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
MT-ND1P03886 USP2-201ENST00000260187 3732 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
MT-ND1P03886 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
MT-ND1P03886 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
MT-ND1P03886 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
MT-ND1P03886 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
MT-ND1P03886 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
MT-ND1P03886 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC14.19□□□□□ -0.14
MT-ND1P03886 FAM200B-201ENST00000422728 2962 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
MT-ND1P03886 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC14.19□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms