Protein–RNA interactions for Protein: P01906

HLA-DQA2, HLA class II histocompatibility antigen, DQ alpha 2 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA2P01906 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
HLA-DQA2P01906 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
HLA-DQA2P01906 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
HLA-DQA2P01906 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
HLA-DQA2P01906 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
HLA-DQA2P01906 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC13.54□□□□□ -0.24
HLA-DQA2P01906 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC13.54□□□□□ -0.24
HLA-DQA2P01906 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC13.54□□□□□ -0.24
HLA-DQA2P01906 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
HLA-DQA2P01906 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC13.54□□□□□ -0.24
HLA-DQA2P01906 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC13.54□□□□□ -0.24
HLA-DQA2P01906 PRR29-204ENST00000577953 565 ntTSL 4 BASIC13.54□□□□□ -0.24
HLA-DQA2P01906 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC13.54□□□□□ -0.24
HLA-DQA2P01906 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC13.54□□□□□ -0.24
HLA-DQA2P01906 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC13.54□□□□□ -0.24
HLA-DQA2P01906 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC13.54□□□□□ -0.24
HLA-DQA2P01906 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC13.54□□□□□ -0.24
HLA-DQA2P01906 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
HLA-DQA2P01906 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
HLA-DQA2P01906 HCFC2-201ENST00000229330 5734 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
HLA-DQA2P01906 CARMIL2-202ENST00000545661 4119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
HLA-DQA2P01906 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC13.54□□□□□ -0.24
HLA-DQA2P01906 MBP-205ENST00000397860 4844 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
HLA-DQA2P01906 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC13.54□□□□□ -0.24
HLA-DQA2P01906 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC13.54□□□□□ -0.24
HLA-DQA2P01906 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC13.54□□□□□ -0.24
HLA-DQA2P01906 SUGP2-203ENST00000452918 6176 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
HLA-DQA2P01906 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
HLA-DQA2P01906 TKFC-201ENST00000394900 4696 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
HLA-DQA2P01906 SUSD6-201ENST00000342745 5388 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
HLA-DQA2P01906 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
HLA-DQA2P01906 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
HLA-DQA2P01906 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC13.53□□□□□ -0.24
HLA-DQA2P01906 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
HLA-DQA2P01906 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
HLA-DQA2P01906 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
HLA-DQA2P01906 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
HLA-DQA2P01906 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
HLA-DQA2P01906 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC13.53□□□□□ -0.24
HLA-DQA2P01906 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
HLA-DQA2P01906 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
HLA-DQA2P01906 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
HLA-DQA2P01906 BAG2-201ENST00000370693 6651 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
HLA-DQA2P01906 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
HLA-DQA2P01906 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
HLA-DQA2P01906 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
HLA-DQA2P01906 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
HLA-DQA2P01906 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
HLA-DQA2P01906 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
HLA-DQA2P01906 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
HLA-DQA2P01906 SUN1-204ENST00000403868 978 ntTSL 2 BASIC13.53□□□□□ -0.24
HLA-DQA2P01906 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC13.53□□□□□ -0.24
HLA-DQA2P01906 TSSK5P-201ENST00000423978 907 ntBASIC13.53□□□□□ -0.24
HLA-DQA2P01906 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
HLA-DQA2P01906 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC13.53□□□□□ -0.24
HLA-DQA2P01906 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC13.53□□□□□ -0.24
HLA-DQA2P01906 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC13.53□□□□□ -0.24
HLA-DQA2P01906 AC009477.1-201ENST00000452936 217 ntBASIC13.53□□□□□ -0.24
HLA-DQA2P01906 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC13.53□□□□□ -0.24
HLA-DQA2P01906 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC13.53□□□□□ -0.24
HLA-DQA2P01906 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC13.53□□□□□ -0.24
HLA-DQA2P01906 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
HLA-DQA2P01906 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC13.53□□□□□ -0.24
HLA-DQA2P01906 SRD5A3P1-201ENST00000603021 949 ntBASIC13.53□□□□□ -0.24
HLA-DQA2P01906 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC13.53□□□□□ -0.24
HLA-DQA2P01906 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
HLA-DQA2P01906 AL360270.3-201ENST00000609118 1348 ntBASIC13.53□□□□□ -0.24
HLA-DQA2P01906 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
HLA-DQA2P01906 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC13.53□□□□□ -0.24
HLA-DQA2P01906 DSE-201ENST00000331677 7237 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
HLA-DQA2P01906 CLK3P2-201ENST00000427566 1453 ntBASIC13.53□□□□□ -0.24
HLA-DQA2P01906 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
HLA-DQA2P01906 CTR9-201ENST00000361367 4586 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
HLA-DQA2P01906 AC022144.1-201ENST00000602255 1580 ntBASIC13.53□□□□□ -0.24
HLA-DQA2P01906 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
HLA-DQA2P01906 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
HLA-DQA2P01906 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC13.53□□□□□ -0.24
HLA-DQA2P01906 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
HLA-DQA2P01906 PRR12-201ENST00000418929 6955 ntAPPRIS P2 TSL 5 BASIC13.53□□□□□ -0.24
HLA-DQA2P01906 ABR-228ENST00000574437 3196 ntTSL 5 BASIC13.53□□□□□ -0.24
HLA-DQA2P01906 TNNI1-207ENST00000622580 6142 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.24
HLA-DQA2P01906 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
HLA-DQA2P01906 RSBN1L-201ENST00000334955 6422 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
HLA-DQA2P01906 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
HLA-DQA2P01906 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC13.52□□□□□ -0.24
HLA-DQA2P01906 TRIB2-201ENST00000155926 4391 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
HLA-DQA2P01906 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
HLA-DQA2P01906 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
HLA-DQA2P01906 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC13.52□□□□□ -0.24
HLA-DQA2P01906 AC073957.3-201ENST00000609998 6758 ntBASIC13.52□□□□□ -0.24
HLA-DQA2P01906 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
HLA-DQA2P01906 BTRC-203ENST00000393441 6084 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
HLA-DQA2P01906 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
HLA-DQA2P01906 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
HLA-DQA2P01906 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
HLA-DQA2P01906 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC13.52□□□□□ -0.25
HLA-DQA2P01906 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC13.52□□□□□ -0.25
HLA-DQA2P01906 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC13.52□□□□□ -0.25
HLA-DQA2P01906 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
HLA-DQA2P01906 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC13.52□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 57.2 ms