Protein–RNA interactions for Protein: P01850

TRBC1, T-cell receptor beta-1 chain C region, humanhuman

Predictions only

Length 177 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBC1P01850 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRBC1P01850 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRBC1P01850 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TRBC1P01850 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRBC1P01850 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC14.98□□□□□ -0.01
TRBC1P01850 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC14.98□□□□□ -0.01
TRBC1P01850 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC14.98□□□□□ -0.01
TRBC1P01850 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
TRBC1P01850 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRBC1P01850 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRBC1P01850 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRBC1P01850 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRBC1P01850 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRBC1P01850 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TRBC1P01850 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC14.98□□□□□ -0.01
TRBC1P01850 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TRBC1P01850 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRBC1P01850 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
TRBC1P01850 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TRBC1P01850 RGS5-214ENST00000429865 754 ntTSL 3 BASIC14.98□□□□□ -0.01
TRBC1P01850 YBX1P6-201ENST00000442962 1002 ntBASIC14.98□□□□□ -0.01
TRBC1P01850 BNIP3P42-201ENST00000454982 569 ntBASIC14.98□□□□□ -0.01
TRBC1P01850 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC14.98□□□□□ -0.01
TRBC1P01850 HNRNPA1P48-202ENST00000565308 961 ntBASIC14.98□□□□□ -0.01
TRBC1P01850 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC14.98□□□□□ -0.01
TRBC1P01850 NAA38-206ENST00000576384 424 ntTSL 2 BASIC14.98□□□□□ -0.01
TRBC1P01850 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRBC1P01850 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC14.98□□□□□ -0.01
TRBC1P01850 BNIP3P29-201ENST00000598302 571 ntBASIC14.98□□□□□ -0.01
TRBC1P01850 AL008721.1-201ENST00000609964 604 ntBASIC14.98□□□□□ -0.01
TRBC1P01850 ZACNP1-201ENST00000612259 710 ntBASIC14.98□□□□□ -0.01
TRBC1P01850 AC011447.5-201ENST00000616168 564 ntBASIC14.98□□□□□ -0.01
TRBC1P01850 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRBC1P01850 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC14.98□□□□□ -0.01
TRBC1P01850 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TRBC1P01850 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRBC1P01850 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRBC1P01850 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC14.98□□□□□ -0.01
TRBC1P01850 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC14.98□□□□□ -0.01
TRBC1P01850 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC14.98□□□□□ -0.01
TRBC1P01850 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC14.98□□□□□ -0.01
TRBC1P01850 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC14.98□□□□□ -0.01
TRBC1P01850 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TRBC1P01850 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRBC1P01850 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC14.98□□□□□ -0.01
TRBC1P01850 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TRBC1P01850 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TRBC1P01850 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC14.98□□□□□ -0.01
TRBC1P01850 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC14.97□□□□□ -0.01
TRBC1P01850 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRBC1P01850 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
TRBC1P01850 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRBC1P01850 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRBC1P01850 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
TRBC1P01850 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC14.97□□□□□ -0.01
TRBC1P01850 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC14.97□□□□□ -0.01
TRBC1P01850 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
TRBC1P01850 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC14.97□□□□□ -0.01
TRBC1P01850 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
TRBC1P01850 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC14.97□□□□□ -0.01
TRBC1P01850 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TRBC1P01850 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRBC1P01850 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRBC1P01850 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC14.97□□□□□ -0.01
TRBC1P01850 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC14.97□□□□□ -0.01
TRBC1P01850 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC14.97□□□□□ -0.01
TRBC1P01850 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRBC1P01850 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRBC1P01850 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRBC1P01850 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC14.97□□□□□ -0.01
TRBC1P01850 AL136309.1-201ENST00000403917 691 ntBASIC14.97□□□□□ -0.01
TRBC1P01850 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
TRBC1P01850 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC14.97□□□□□ -0.01
TRBC1P01850 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC14.97□□□□□ -0.01
TRBC1P01850 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC14.97□□□□□ -0.01
TRBC1P01850 HOMER2P2-201ENST00000451621 847 ntBASIC14.97□□□□□ -0.01
TRBC1P01850 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TRBC1P01850 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TRBC1P01850 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TRBC1P01850 RNA5SP412-201ENST00000516234 123 ntBASIC14.97□□□□□ -0.01
TRBC1P01850 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TRBC1P01850 VPS18-202ENST00000558474 873 ntTSL 3 BASIC14.97□□□□□ -0.01
TRBC1P01850 PPY2P-201ENST00000582808 702 ntBASIC14.97□□□□□ -0.01
TRBC1P01850 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TRBC1P01850 Six3os1_5.1-201ENST00000611000 271 ntBASIC14.97□□□□□ -0.01
TRBC1P01850 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC14.97□□□□□ -0.01
TRBC1P01850 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC14.97□□□□□ -0.01
TRBC1P01850 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC14.97□□□□□ -0.01
TRBC1P01850 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC14.97□□□□□ -0.01
TRBC1P01850 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC14.97□□□□□ -0.01
TRBC1P01850 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC14.97□□□□□ -0.01
TRBC1P01850 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC14.97□□□□□ -0.01
TRBC1P01850 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRBC1P01850 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRBC1P01850 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRBC1P01850 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRBC1P01850 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
TRBC1P01850 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TRBC1P01850 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC14.97□□□□□ -0.01
TRBC1P01850 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms