Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC15.85■□□□□ 0.13
TIMP1P01033 AP003390.1-201ENST00000533253 523 ntTSL 5 BASIC15.85■□□□□ 0.13
TIMP1P01033 ZSCAN2-210ENST00000538076 1109 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
TIMP1P01033 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC15.85■□□□□ 0.13
TIMP1P01033 TMEM202-AS1-201ENST00000562573 723 ntTSL 3 BASIC15.85■□□□□ 0.13
TIMP1P01033 DRG2-220ENST00000583355 891 ntTSL 3 BASIC15.85■□□□□ 0.13
TIMP1P01033 AP005212.2-201ENST00000584979 510 ntBASIC15.85■□□□□ 0.13
TIMP1P01033 AP001029.1-201ENST00000589843 168 ntTSL 3 BASIC15.85■□□□□ 0.13
TIMP1P01033 AC025048.2-201ENST00000590744 786 ntTSL 2 BASIC15.85■□□□□ 0.13
TIMP1P01033 FXYD3-204ENST00000603181 758 ntAPPRIS P1 TSL 3 BASIC15.85■□□□□ 0.13
TIMP1P01033 AC009145.4-201ENST00000625119 1294 ntBASIC15.85■□□□□ 0.13
TIMP1P01033 AC027559.1-203ENST00000635726 517 ntTSL 5 BASIC15.85■□□□□ 0.13
TIMP1P01033 TTC23L-209ENST00000638320 1185 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
TIMP1P01033 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC15.85■□□□□ 0.13
TIMP1P01033 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TIMP1P01033 LAMA1-209ENST00000638611 1310 ntTSL 5 BASIC15.85■□□□□ 0.13
TIMP1P01033 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC15.85■□□□□ 0.13
TIMP1P01033 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC15.85■□□□□ 0.13
TIMP1P01033 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
TIMP1P01033 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC15.85■□□□□ 0.13
TIMP1P01033 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC15.85■□□□□ 0.13
TIMP1P01033 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC15.85■□□□□ 0.13
TIMP1P01033 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC15.85■□□□□ 0.13
TIMP1P01033 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
TIMP1P01033 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TIMP1P01033 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
TIMP1P01033 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TIMP1P01033 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TIMP1P01033 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
TIMP1P01033 KCTD6-202ENST00000404589 1533 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
TIMP1P01033 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
TIMP1P01033 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC15.84■□□□□ 0.13
TIMP1P01033 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
TIMP1P01033 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
TIMP1P01033 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
TIMP1P01033 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
TIMP1P01033 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
TIMP1P01033 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC15.84■□□□□ 0.13
TIMP1P01033 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC15.84■□□□□ 0.13
TIMP1P01033 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC15.84■□□□□ 0.13
TIMP1P01033 JTB-202ENST00000356648 1040 ntTSL 2 BASIC15.84■□□□□ 0.13
TIMP1P01033 PLAC9-203ENST00000372270 534 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
TIMP1P01033 ZNRD1-203ENST00000376782 736 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
TIMP1P01033 GSTT2B-202ENST00000404172 819 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
TIMP1P01033 CELP-201ENST00000411440 1249 ntTSL 5 BASIC15.84■□□□□ 0.13
TIMP1P01033 CTHRC1-202ENST00000415886 571 ntTSL 2 BASIC15.84■□□□□ 0.13
TIMP1P01033 AC244197.1-201ENST00000456494 951 ntBASIC15.84■□□□□ 0.13
TIMP1P01033 AC034231.1-201ENST00000507251 537 ntTSL 4 BASIC15.84■□□□□ 0.13
TIMP1P01033 AC026191.1-204ENST00000517846 608 ntTSL 3 BASIC15.84■□□□□ 0.13
TIMP1P01033 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC15.84■□□□□ 0.13
TIMP1P01033 SHBG-210ENST00000572262 984 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
TIMP1P01033 THY1-209ENST00000580275 578 ntTSL 3 BASIC15.84■□□□□ 0.13
TIMP1P01033 AC005759.1-202ENST00000599416 415 ntTSL 3 BASIC15.84■□□□□ 0.13
TIMP1P01033 AL356417.2-202ENST00000608986 532 ntTSL 3 BASIC15.84■□□□□ 0.13
TIMP1P01033 AL136040.2-201ENST00000618431 1130 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
TIMP1P01033 RPL13A-213ENST00000621674 1098 ntTSL 5 BASIC15.84■□□□□ 0.13
TIMP1P01033 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC15.84■□□□□ 0.13
TIMP1P01033 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC15.84■□□□□ 0.13
TIMP1P01033 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC15.84■□□□□ 0.13
TIMP1P01033 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TIMP1P01033 AL136172.1-201ENST00000598590 1394 ntBASIC15.84■□□□□ 0.13
TIMP1P01033 AL513315.1-201ENST00000640756 1370 ntTSL 5 BASIC15.84■□□□□ 0.13
TIMP1P01033 ATF4-202ENST00000396680 1419 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TIMP1P01033 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
TIMP1P01033 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TIMP1P01033 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
TIMP1P01033 AC025183.3-201ENST00000623526 1482 ntBASIC15.84■□□□□ 0.13
TIMP1P01033 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TIMP1P01033 AL672207.1-201ENST00000328462 1570 ntBASIC15.83■□□□□ 0.13
TIMP1P01033 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.13
TIMP1P01033 LTF-202ENST00000417439 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
TIMP1P01033 TXNDC9-201ENST00000264255 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
TIMP1P01033 KIR2DS4-201ENST00000339924 1608 ntAPPRIS P5 TSL 1 (best) BASIC15.83■□□□□ 0.13
TIMP1P01033 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
TIMP1P01033 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC15.83■□□□□ 0.13
TIMP1P01033 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.13
TIMP1P01033 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC15.83■□□□□ 0.12
TIMP1P01033 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
TIMP1P01033 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
TIMP1P01033 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TIMP1P01033 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TIMP1P01033 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC15.83■□□□□ 0.12
TIMP1P01033 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
TIMP1P01033 FAM3B-201ENST00000357985 1088 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
TIMP1P01033 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
TIMP1P01033 MDS2-201ENST00000374555 1029 ntAPPRIS P5 TSL 1 (best) BASIC15.83■□□□□ 0.12
TIMP1P01033 GYPC-203ENST00000409836 932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
TIMP1P01033 AL354892.2-201ENST00000413088 403 ntTSL 5 BASIC15.83■□□□□ 0.12
TIMP1P01033 RGS5-216ENST00000449680 788 ntTSL 3 BASIC15.83■□□□□ 0.12
TIMP1P01033 GNG10P1-201ENST00000452289 199 ntBASIC15.83■□□□□ 0.12
TIMP1P01033 POLR2J3-217ENST00000513438 546 ntTSL 3 BASIC15.83■□□□□ 0.12
TIMP1P01033 RNA5SP406-201ENST00000516106 112 ntBASIC15.83■□□□□ 0.12
TIMP1P01033 AL365275.1-201ENST00000518570 471 ntTSL 2 BASIC15.83■□□□□ 0.12
TIMP1P01033 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC15.83■□□□□ 0.12
TIMP1P01033 OCEL1-206ENST00000597836 1044 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
TIMP1P01033 AC006548.2-201ENST00000605217 529 ntBASIC15.83■□□□□ 0.12
TIMP1P01033 HMGB1P24-201ENST00000611897 328 ntBASIC15.83■□□□□ 0.12
TIMP1P01033 MIR6746-201ENST00000620971 63 ntBASIC15.83■□□□□ 0.12
TIMP1P01033 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TIMP1P01033 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 135.6 ms