Protein–RNA interactions for Protein: P00395

MT-CO1, Cytochrome c oxidase subunit 1, humanhuman

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-CO1P00395 AC023908.3-201ENST00000564211 3047 ntBASIC15.39■□□□□ 0.05
MT-CO1P00395 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
MT-CO1P00395 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC15.39■□□□□ 0.05
MT-CO1P00395 LINC00528-201ENST00000600723 2160 ntBASIC15.39■□□□□ 0.05
MT-CO1P00395 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
MT-CO1P00395 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
MT-CO1P00395 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
MT-CO1P00395 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
MT-CO1P00395 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
MT-CO1P00395 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
MT-CO1P00395 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
MT-CO1P00395 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
MT-CO1P00395 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
MT-CO1P00395 PARN-202ENST00000420015 2360 ntTSL 2 BASIC15.39■□□□□ 0.05
MT-CO1P00395 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC15.39■□□□□ 0.05
MT-CO1P00395 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
MT-CO1P00395 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
MT-CO1P00395 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
MT-CO1P00395 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
MT-CO1P00395 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
MT-CO1P00395 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
MT-CO1P00395 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
MT-CO1P00395 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
MT-CO1P00395 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC15.38■□□□□ 0.05
MT-CO1P00395 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
MT-CO1P00395 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC15.38■□□□□ 0.05
MT-CO1P00395 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
MT-CO1P00395 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
MT-CO1P00395 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
MT-CO1P00395 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
MT-CO1P00395 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
MT-CO1P00395 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
MT-CO1P00395 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
MT-CO1P00395 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
MT-CO1P00395 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC15.38■□□□□ 0.05
MT-CO1P00395 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC15.38■□□□□ 0.05
MT-CO1P00395 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC15.38■□□□□ 0.05
MT-CO1P00395 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
MT-CO1P00395 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
MT-CO1P00395 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC15.38■□□□□ 0.05
MT-CO1P00395 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
MT-CO1P00395 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC15.38■□□□□ 0.05
MT-CO1P00395 HNRNPA1P48-202ENST00000565308 961 ntBASIC15.38■□□□□ 0.05
MT-CO1P00395 AC009542.2-202ENST00000619004 1067 ntBASIC15.38■□□□□ 0.05
MT-CO1P00395 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
MT-CO1P00395 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
MT-CO1P00395 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC15.38■□□□□ 0.05
MT-CO1P00395 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
MT-CO1P00395 AGAP7P-201ENST00000582299 2062 ntBASIC15.38■□□□□ 0.05
MT-CO1P00395 AGAP14-201ENST00000624701 2060 ntBASIC15.38■□□□□ 0.05
MT-CO1P00395 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC15.38■□□□□ 0.05
MT-CO1P00395 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
MT-CO1P00395 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
MT-CO1P00395 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC15.38■□□□□ 0.05
MT-CO1P00395 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
MT-CO1P00395 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
MT-CO1P00395 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
MT-CO1P00395 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
MT-CO1P00395 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
MT-CO1P00395 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC15.38■□□□□ 0.05
MT-CO1P00395 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
MT-CO1P00395 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
MT-CO1P00395 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC15.38■□□□□ 0.05
MT-CO1P00395 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
MT-CO1P00395 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
MT-CO1P00395 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
MT-CO1P00395 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
MT-CO1P00395 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC15.38■□□□□ 0.05
MT-CO1P00395 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
MT-CO1P00395 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC15.37■□□□□ 0.05
MT-CO1P00395 CICP23-201ENST00000605013 2741 ntBASIC15.37■□□□□ 0.05
MT-CO1P00395 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
MT-CO1P00395 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC15.37■□□□□ 0.05
MT-CO1P00395 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
MT-CO1P00395 WASH3P-207ENST00000560956 1394 ntBASIC15.37■□□□□ 0.05
MT-CO1P00395 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
MT-CO1P00395 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
MT-CO1P00395 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC15.37■□□□□ 0.05
MT-CO1P00395 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC15.37■□□□□ 0.05
MT-CO1P00395 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
MT-CO1P00395 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC15.37■□□□□ 0.05
MT-CO1P00395 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
MT-CO1P00395 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
MT-CO1P00395 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
MT-CO1P00395 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
MT-CO1P00395 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
MT-CO1P00395 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC15.37■□□□□ 0.05
MT-CO1P00395 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
MT-CO1P00395 FAM21FP-201ENST00000426241 1131 ntBASIC15.37■□□□□ 0.05
MT-CO1P00395 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC15.37■□□□□ 0.05
MT-CO1P00395 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
MT-CO1P00395 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC15.37■□□□□ 0.05
MT-CO1P00395 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC15.37■□□□□ 0.05
MT-CO1P00395 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC15.37■□□□□ 0.05
MT-CO1P00395 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC15.37■□□□□ 0.05
MT-CO1P00395 AC023310.1-201ENST00000554836 735 ntBASIC15.37■□□□□ 0.05
MT-CO1P00395 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
MT-CO1P00395 TECR-220ENST00000600083 1204 ntTSL 2 BASIC15.37■□□□□ 0.05
MT-CO1P00395 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC15.37■□□□□ 0.05
MT-CO1P00395 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC15.37■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms