Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 PFN2-212ENST00000490975 858 ntTSL 4 BASIC21.78■■□□□ 1.08
RAPGEF3O95398 BCRP4-201ENST00000506079 804 ntBASIC21.78■■□□□ 1.08
RAPGEF3O95398 KNOP1P1-201ENST00000542108 989 ntBASIC21.78■■□□□ 1.08
RAPGEF3O95398 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC21.78■■□□□ 1.08
RAPGEF3O95398 NDUFB10P1-201ENST00000567319 521 ntBASIC21.78■■□□□ 1.08
RAPGEF3O95398 RBFOX3-206ENST00000582043 1143 ntTSL 5 BASIC21.78■■□□□ 1.08
RAPGEF3O95398 GAS7-216ENST00000583882 553 ntTSL 5 BASIC21.78■■□□□ 1.08
RAPGEF3O95398 AC110057.1-201ENST00000636031 898 ntBASIC21.78■■□□□ 1.08
RAPGEF3O95398 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC21.78■■□□□ 1.08
RAPGEF3O95398 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
RAPGEF3O95398 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
RAPGEF3O95398 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
RAPGEF3O95398 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
RAPGEF3O95398 AC099398.1-201ENST00000567919 2776 ntBASIC21.78■■□□□ 1.08
RAPGEF3O95398 ATP5A1-201ENST00000282050 1945 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
RAPGEF3O95398 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC21.78■■□□□ 1.08
RAPGEF3O95398 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC21.78■■□□□ 1.08
RAPGEF3O95398 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
RAPGEF3O95398 SERPINA1-209ENST00000449399 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
RAPGEF3O95398 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
RAPGEF3O95398 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
RAPGEF3O95398 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
RAPGEF3O95398 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
RAPGEF3O95398 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
RAPGEF3O95398 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC21.77■■□□□ 1.08
RAPGEF3O95398 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC21.77■■□□□ 1.08
RAPGEF3O95398 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
RAPGEF3O95398 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC21.77■■□□□ 1.08
RAPGEF3O95398 LCN6-201ENST00000341206 717 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
RAPGEF3O95398 TREM2-202ENST00000373113 1044 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
RAPGEF3O95398 PGAM1P11-201ENST00000416729 680 ntBASIC21.77■■□□□ 1.08
RAPGEF3O95398 IFI35-204ENST00000438323 1232 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
RAPGEF3O95398 CITED1-209ENST00000453707 998 ntAPPRIS ALT2 TSL 3 BASIC21.77■■□□□ 1.08
RAPGEF3O95398 AC128689.1-202ENST00000459861 827 ntTSL 3 BASIC21.77■■□□□ 1.08
RAPGEF3O95398 RN7SL375P-201ENST00000492442 298 ntBASIC21.77■■□□□ 1.08
RAPGEF3O95398 PAX5-210ENST00000520281 969 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
RAPGEF3O95398 AC023389.1-201ENST00000577846 576 ntTSL 4 BASIC21.77■■□□□ 1.08
RAPGEF3O95398 CR392039.1-201ENST00000623217 204 ntBASIC21.77■■□□□ 1.08
RAPGEF3O95398 LINC01002-234ENST00000633808 848 ntTSL 5 BASIC21.77■■□□□ 1.08
RAPGEF3O95398 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
RAPGEF3O95398 MRPS10-201ENST00000053468 2110 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
RAPGEF3O95398 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
RAPGEF3O95398 STRN-202ENST00000379213 2254 ntTSL 5 BASIC21.77■■□□□ 1.08
RAPGEF3O95398 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
RAPGEF3O95398 RHOG-201ENST00000351018 1319 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
RAPGEF3O95398 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC21.77■■□□□ 1.07
RAPGEF3O95398 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
RAPGEF3O95398 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
RAPGEF3O95398 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.07
RAPGEF3O95398 DSCAM-AS1-202ENST00000427451 1640 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
RAPGEF3O95398 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.07
RAPGEF3O95398 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
RAPGEF3O95398 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
RAPGEF3O95398 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC21.76■■□□□ 1.07
RAPGEF3O95398 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC21.76■■□□□ 1.07
RAPGEF3O95398 SVOPL-203ENST00000421622 1653 ntTSL 5 BASIC21.76■■□□□ 1.07
RAPGEF3O95398 SERF1B-204ENST00000506542 1666 ntTSL 3 BASIC21.76■■□□□ 1.07
RAPGEF3O95398 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
RAPGEF3O95398 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC21.76■■□□□ 1.07
RAPGEF3O95398 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
RAPGEF3O95398 NKILA-202ENST00000614771 2598 ntBASIC21.76■■□□□ 1.07
RAPGEF3O95398 IL17B-201ENST00000261796 696 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
RAPGEF3O95398 CT55-201ENST00000276241 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
RAPGEF3O95398 CST5-201ENST00000304710 756 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
RAPGEF3O95398 GEMIN8P4-201ENST00000380526 729 ntBASIC21.76■■□□□ 1.07
RAPGEF3O95398 TARBP2-202ENST00000394357 1402 ntTSL 3 BASIC21.76■■□□□ 1.07
RAPGEF3O95398 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
RAPGEF3O95398 GAS5-209ENST00000430245 723 ntTSL 3 BASIC21.76■■□□□ 1.07
RAPGEF3O95398 AC093609.1-201ENST00000434020 952 ntTSL 2 BASIC21.76■■□□□ 1.07
RAPGEF3O95398 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
RAPGEF3O95398 AC087071.1-201ENST00000469264 427 ntTSL 2 BASIC21.76■■□□□ 1.07
RAPGEF3O95398 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
RAPGEF3O95398 AC090152.1-203ENST00000517898 1106 ntTSL 2 BASIC21.76■■□□□ 1.07
RAPGEF3O95398 FXYD6-208ENST00000529335 708 ntTSL 3 BASIC21.76■■□□□ 1.07
RAPGEF3O95398 VENTXP3-201ENST00000546480 773 ntBASIC21.76■■□□□ 1.07
RAPGEF3O95398 DRG2-220ENST00000583355 891 ntTSL 3 BASIC21.76■■□□□ 1.07
RAPGEF3O95398 ADAMTS9-AS1-216ENST00000626280 882 ntTSL 5 BASIC21.76■■□□□ 1.07
RAPGEF3O95398 OSMR-AS1-204ENST00000636516 850 ntTSL 5 BASIC21.76■■□□□ 1.07
RAPGEF3O95398 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
RAPGEF3O95398 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
RAPGEF3O95398 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
RAPGEF3O95398 ZCCHC17-201ENST00000344147 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
RAPGEF3O95398 BIN3-202ENST00000399977 1340 ntTSL 2 BASIC21.76■■□□□ 1.07
RAPGEF3O95398 AC007491.1-201ENST00000637560 1306 ntTSL 5 BASIC21.76■■□□□ 1.07
RAPGEF3O95398 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
RAPGEF3O95398 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC21.76■■□□□ 1.07
RAPGEF3O95398 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
RAPGEF3O95398 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RAPGEF3O95398 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC21.75■■□□□ 1.07
RAPGEF3O95398 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RAPGEF3O95398 JPT1-202ENST00000356033 1519 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
RAPGEF3O95398 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC21.75■■□□□ 1.07
RAPGEF3O95398 PPHLN1-223ENST00000610488 1521 ntTSL 5 BASIC21.75■■□□□ 1.07
RAPGEF3O95398 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RAPGEF3O95398 ASGR1-209ENST00000619926 1384 ntTSL 5 BASIC21.75■■□□□ 1.07
RAPGEF3O95398 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
RAPGEF3O95398 AC139712.1-201ENST00000378256 1875 ntBASIC21.75■■□□□ 1.07
RAPGEF3O95398 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC21.75■■□□□ 1.07
RAPGEF3O95398 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
RAPGEF3O95398 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms