Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 TCERG1L-AS1-201ENST00000436942 472 ntTSL 2 BASIC19.25■□□□□ 0.67
LTN1O94822 BUD31-205ENST00000456893 512 ntTSL 5 BASIC19.25■□□□□ 0.67
LTN1O94822 TNNT2-214ENST00000458432 1182 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
LTN1O94822 RPL18AP8-201ENST00000486071 528 ntBASIC19.25■□□□□ 0.67
LTN1O94822 RN7SL564P-201ENST00000496309 250 ntBASIC19.25■□□□□ 0.67
LTN1O94822 AC011462.2-201ENST00000598887 344 ntTSL 5 BASIC19.25■□□□□ 0.67
LTN1O94822 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC19.25■□□□□ 0.67
LTN1O94822 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
LTN1O94822 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
LTN1O94822 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
LTN1O94822 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LTN1O94822 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC19.25■□□□□ 0.67
LTN1O94822 AC022532.1-201ENST00000624563 1728 ntBASIC19.25■□□□□ 0.67
LTN1O94822 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LTN1O94822 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LTN1O94822 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
LTN1O94822 LIMS1-201ENST00000332345 1235 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
LTN1O94822 TOMM20L-201ENST00000360945 620 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LTN1O94822 OPN1MW2-201ENST00000369929 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LTN1O94822 INS-IGF2-202ENST00000397270 828 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
LTN1O94822 LINC01868-201ENST00000414965 562 ntTSL 4 BASIC19.24■□□□□ 0.67
LTN1O94822 AC108734.2-201ENST00000420887 1069 ntBASIC19.24■□□□□ 0.67
LTN1O94822 POLR2H-203ENST00000430783 1159 ntTSL 2 BASIC19.24■□□□□ 0.67
LTN1O94822 PSMD4P1-201ENST00000433951 1109 ntBASIC19.24■□□□□ 0.67
LTN1O94822 AL355376.1-201ENST00000456082 517 ntTSL 3 BASIC19.24■□□□□ 0.67
LTN1O94822 AC011247.2-201ENST00000457097 233 ntTSL 4 BASIC19.24■□□□□ 0.67
LTN1O94822 IGHV1-12-201ENST00000518307 205 ntBASIC19.24■□□□□ 0.67
LTN1O94822 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LTN1O94822 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC19.24■□□□□ 0.67
LTN1O94822 DNAJB13-203ENST00000537753 912 ntTSL 3 BASIC19.24■□□□□ 0.67
LTN1O94822 PGPEP1-203ENST00000595066 762 ntTSL 2 BASIC19.24■□□□□ 0.67
LTN1O94822 AC064801.2-201ENST00000625052 1303 ntBASIC19.24■□□□□ 0.67
LTN1O94822 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
LTN1O94822 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LTN1O94822 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC19.24■□□□□ 0.67
LTN1O94822 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LTN1O94822 AJ011931.1-201ENST00000618749 2492 ntBASIC19.24■□□□□ 0.67
LTN1O94822 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LTN1O94822 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
LTN1O94822 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC19.24■□□□□ 0.67
LTN1O94822 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
LTN1O94822 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LTN1O94822 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC19.24■□□□□ 0.67
LTN1O94822 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
LTN1O94822 HNRNPA1-201ENST00000330752 1294 ntTSL 5 BASIC19.24■□□□□ 0.67
LTN1O94822 TMEM216-202ENST00000398979 908 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
LTN1O94822 AC092265.1-201ENST00000422638 498 ntTSL 2 BASIC19.24■□□□□ 0.67
LTN1O94822 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
LTN1O94822 PGAM1P12-201ENST00000505622 748 ntBASIC19.24■□□□□ 0.67
LTN1O94822 AC022858.1-202ENST00000521084 393 ntTSL 3 BASIC19.24■□□□□ 0.67
LTN1O94822 AL132994.1-201ENST00000554098 400 ntBASIC19.24■□□□□ 0.67
LTN1O94822 KRT8P2-201ENST00000556193 944 ntBASIC19.24■□□□□ 0.67
LTN1O94822 AC136944.4-201ENST00000568893 660 ntTSL 4 BASIC19.24■□□□□ 0.67
LTN1O94822 AC025048.2-201ENST00000590744 786 ntTSL 2 BASIC19.24■□□□□ 0.67
LTN1O94822 TTC23L-209ENST00000638320 1185 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
LTN1O94822 USP4-203ENST00000415188 1454 ntTSL 3 BASIC19.24■□□□□ 0.67
LTN1O94822 CCT8L1P-201ENST00000465400 1674 ntBASIC19.24■□□□□ 0.67
LTN1O94822 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LTN1O94822 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC19.24■□□□□ 0.67
LTN1O94822 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
LTN1O94822 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LTN1O94822 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC19.23■□□□□ 0.67
LTN1O94822 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
LTN1O94822 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LTN1O94822 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
LTN1O94822 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
LTN1O94822 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC19.23■□□□□ 0.67
LTN1O94822 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LTN1O94822 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
LTN1O94822 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC19.23■□□□□ 0.67
LTN1O94822 CTSS-202ENST00000448301 1421 ntTSL 2 BASIC19.23■□□□□ 0.67
LTN1O94822 SLC50A1-202ENST00000368401 1166 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
LTN1O94822 LINC01485-202ENST00000520324 566 ntTSL 4 BASIC19.23■□□□□ 0.67
LTN1O94822 NAMA-206ENST00000605377 509 ntTSL 5 BASIC19.23■□□□□ 0.67
LTN1O94822 AC010976.2-201ENST00000609697 852 ntBASIC19.23■□□□□ 0.67
LTN1O94822 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
LTN1O94822 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LTN1O94822 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
LTN1O94822 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
LTN1O94822 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
LTN1O94822 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
LTN1O94822 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
LTN1O94822 TNFRSF1A-202ENST00000366159 1339 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
LTN1O94822 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC19.22■□□□□ 0.67
LTN1O94822 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC19.22■□□□□ 0.67
LTN1O94822 GTF3C6-201ENST00000329970 952 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
LTN1O94822 Z69890.1-201ENST00000382990 339 ntBASIC19.22■□□□□ 0.67
LTN1O94822 CYB561D1-203ENST00000393709 620 ntAPPRIS ALT1 TSL 4 BASIC19.22■□□□□ 0.67
LTN1O94822 AC098934.1-203ENST00000442868 1262 ntBASIC19.22■□□□□ 0.67
LTN1O94822 AL157792.1-201ENST00000488281 530 ntBASIC19.22■□□□□ 0.67
LTN1O94822 AC068867.1-201ENST00000559855 150 ntBASIC19.22■□□□□ 0.67
LTN1O94822 AL022344.2-201ENST00000568976 968 ntBASIC19.22■□□□□ 0.67
LTN1O94822 AC140113.1-201ENST00000603467 169 ntBASIC19.22■□□□□ 0.67
LTN1O94822 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC19.22■□□□□ 0.67
LTN1O94822 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
LTN1O94822 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
LTN1O94822 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
LTN1O94822 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC19.22■□□□□ 0.67
LTN1O94822 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
LTN1O94822 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms