Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 NR0B1-201ENST00000378963 475 ntTSL 2 BASIC6.46□□□□□ -1.37
USH2AO75445 COPS7B-204ENST00000409091 806 ntTSL 5 BASIC6.46□□□□□ -1.37
USH2AO75445 AC068057.1-201ENST00000453322 709 ntTSL 2 BASIC6.46□□□□□ -1.37
USH2AO75445 ERAS-202ENST00000636362 826 ntAPPRIS P1 TSL 3 BASIC6.46□□□□□ -1.37
USH2AO75445 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC6.46□□□□□ -1.37
USH2AO75445 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC6.46□□□□□ -1.37
USH2AO75445 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.37
USH2AO75445 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC6.46□□□□□ -1.37
USH2AO75445 AC138761.4-201ENST00000578881 1514 ntTSL 3 BASIC6.46□□□□□ -1.37
USH2AO75445 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC6.46□□□□□ -1.37
USH2AO75445 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC6.46□□□□□ -1.37
USH2AO75445 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC6.46□□□□□ -1.37
USH2AO75445 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
USH2AO75445 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC6.46□□□□□ -1.37
USH2AO75445 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
USH2AO75445 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
USH2AO75445 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
USH2AO75445 ARL1-202ENST00000536227 1322 ntTSL 2 BASIC6.46□□□□□ -1.37
USH2AO75445 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
USH2AO75445 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC6.46□□□□□ -1.38
USH2AO75445 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC6.46□□□□□ -1.38
USH2AO75445 AC131011.1-201ENST00000366134 672 ntTSL 3 BASIC6.46□□□□□ -1.38
USH2AO75445 SUMO1-202ENST00000392245 1071 ntAPPRIS P1 TSL 3 BASIC6.46□□□□□ -1.38
USH2AO75445 CDRT15L2-201ENST00000399044 1048 ntAPPRIS P1 TSL 2 BASIC6.46□□□□□ -1.38
USH2AO75445 SNRPCP15-201ENST00000424055 192 ntBASIC6.46□□□□□ -1.38
USH2AO75445 CYP4F29P-202ENST00000428301 1279 ntTSL 2 BASIC6.46□□□□□ -1.38
USH2AO75445 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
USH2AO75445 CA5BP1-205ENST00000435806 1064 ntBASIC6.46□□□□□ -1.38
USH2AO75445 AC004066.1-201ENST00000502488 802 ntBASIC6.46□□□□□ -1.38
USH2AO75445 SLC25A3-215ENST00000551265 580 ntTSL 4 BASIC6.46□□□□□ -1.38
USH2AO75445 AL136298.3-201ENST00000556746 445 ntBASIC6.46□□□□□ -1.38
USH2AO75445 MIR663AHG-218ENST00000598448 804 ntTSL 5 BASIC6.46□□□□□ -1.38
USH2AO75445 APOBEC3H-207ENST00000613996 465 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
USH2AO75445 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
USH2AO75445 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC6.46□□□□□ -1.38
USH2AO75445 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
USH2AO75445 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
USH2AO75445 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
USH2AO75445 AC127383.1-201ENST00000444697 1800 ntBASIC6.46□□□□□ -1.38
USH2AO75445 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
USH2AO75445 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC6.46□□□□□ -1.38
USH2AO75445 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC6.46□□□□□ -1.38
USH2AO75445 LINC02344-201ENST00000443576 644 ntTSL 2 BASIC6.46□□□□□ -1.38
USH2AO75445 AC092910.2-201ENST00000491262 348 ntBASIC6.46□□□□□ -1.38
USH2AO75445 ALG1L7P-201ENST00000502317 768 ntBASIC6.46□□□□□ -1.38
USH2AO75445 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC6.46□□□□□ -1.38
USH2AO75445 THEG-204ENST00000530711 1162 ntAPPRIS ALT2 TSL 3 BASIC6.46□□□□□ -1.38
USH2AO75445 AC087203.1-201ENST00000532111 1181 ntBASIC6.46□□□□□ -1.38
USH2AO75445 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
USH2AO75445 CACNA1C-IT3-201ENST00000542680 622 ntTSL 3 BASIC6.46□□□□□ -1.38
USH2AO75445 RN7SL605P-201ENST00000577229 281 ntBASIC6.46□□□□□ -1.38
USH2AO75445 HAMP-203ENST00000598398 652 ntAPPRIS P1 TSL 2 BASIC6.46□□□□□ -1.38
USH2AO75445 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC6.46□□□□□ -1.38
USH2AO75445 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
USH2AO75445 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC6.46□□□□□ -1.38
USH2AO75445 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC6.46□□□□□ -1.38
USH2AO75445 OPRM1-201ENST00000229768 1465 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
USH2AO75445 UBL4B-201ENST00000334179 1478 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
USH2AO75445 OPRM1-207ENST00000428397 1481 ntAPPRIS P3 TSL 1 (best) BASIC6.46□□□□□ -1.38
USH2AO75445 FAM226B-201ENST00000602508 1490 ntBASIC6.46□□□□□ -1.38
USH2AO75445 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC6.46□□□□□ -1.38
USH2AO75445 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC6.46□□□□□ -1.38
USH2AO75445 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC6.46□□□□□ -1.38
USH2AO75445 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC6.46□□□□□ -1.38
USH2AO75445 SPC25-201ENST00000282074 1354 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
USH2AO75445 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.38
USH2AO75445 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
USH2AO75445 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
USH2AO75445 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC6.46□□□□□ -1.38
USH2AO75445 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
USH2AO75445 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC6.46□□□□□ -1.38
USH2AO75445 SHMT1P1-201ENST00000419974 1312 ntBASIC6.46□□□□□ -1.38
USH2AO75445 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
USH2AO75445 AC006372.4-201ENST00000624122 1543 ntBASIC6.46□□□□□ -1.38
USH2AO75445 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
USH2AO75445 CSAG1-203ENST00000370291 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.38
USH2AO75445 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
USH2AO75445 RPSAP12-201ENST00000435879 888 ntBASIC6.46□□□□□ -1.38
USH2AO75445 OR2A1-AS1-203ENST00000468575 568 ntBASIC6.46□□□□□ -1.38
USH2AO75445 FAM86JP-202ENST00000484500 988 ntBASIC6.46□□□□□ -1.38
USH2AO75445 PTPN20-229ENST00000513756 640 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
USH2AO75445 MBP-230ENST00000528160 584 ntTSL 5 BASIC6.46□□□□□ -1.38
USH2AO75445 AC140912.1-202ENST00000561802 194 ntTSL 3 BASIC6.46□□□□□ -1.38
USH2AO75445 CYB5D2-202ENST00000573984 495 ntTSL 4 BASIC6.46□□□□□ -1.38
USH2AO75445 AC239600.1-201ENST00000603201 462 ntBASIC6.46□□□□□ -1.38
USH2AO75445 AC091769.1-201ENST00000619576 568 ntBASIC6.46□□□□□ -1.38
USH2AO75445 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC6.46□□□□□ -1.38
USH2AO75445 CT55-201ENST00000276241 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.38
USH2AO75445 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
USH2AO75445 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC6.46□□□□□ -1.38
USH2AO75445 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
USH2AO75445 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.38
USH2AO75445 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC6.46□□□□□ -1.38
USH2AO75445 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
USH2AO75445 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
USH2AO75445 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
USH2AO75445 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC6.45□□□□□ -1.38
USH2AO75445 MIR193A-201ENST00000384882 88 ntBASIC6.45□□□□□ -1.38
USH2AO75445 TISP43-202ENST00000409982 1039 ntAPPRIS P5 TSL 1 (best) BASIC6.45□□□□□ -1.38
USH2AO75445 AC073869.2-201ENST00000417338 1026 ntBASIC6.45□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 93.4 ms