Protein–RNA interactions for Protein: O43837

IDH3B, Isocitrate dehydrogenase [NAD] subunit beta, mitochondrial, humanhuman

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3BO43837 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
IDH3BO43837 SLC22A23-202ENST00000380302 2883 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
IDH3BO43837 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
IDH3BO43837 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
IDH3BO43837 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC13.88□□□□□ -0.19
IDH3BO43837 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
IDH3BO43837 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
IDH3BO43837 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC13.88□□□□□ -0.19
IDH3BO43837 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
IDH3BO43837 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
IDH3BO43837 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
IDH3BO43837 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC13.87□□□□□ -0.19
IDH3BO43837 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC13.87□□□□□ -0.19
IDH3BO43837 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
IDH3BO43837 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
IDH3BO43837 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
IDH3BO43837 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
IDH3BO43837 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
IDH3BO43837 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC13.87□□□□□ -0.19
IDH3BO43837 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC13.87□□□□□ -0.19
IDH3BO43837 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
IDH3BO43837 RPL37AP1-201ENST00000412502 279 ntBASIC13.87□□□□□ -0.19
IDH3BO43837 BX842568.4-201ENST00000421222 227 ntBASIC13.87□□□□□ -0.19
IDH3BO43837 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC13.87□□□□□ -0.19
IDH3BO43837 SDHAP3-202ENST00000515467 728 ntBASIC13.87□□□□□ -0.19
IDH3BO43837 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC13.87□□□□□ -0.19
IDH3BO43837 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC13.87□□□□□ -0.19
IDH3BO43837 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC13.87□□□□□ -0.19
IDH3BO43837 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC13.87□□□□□ -0.19
IDH3BO43837 AC074044.1-201ENST00000609673 707 ntBASIC13.87□□□□□ -0.19
IDH3BO43837 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC13.87□□□□□ -0.19
IDH3BO43837 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
IDH3BO43837 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
IDH3BO43837 LPO-201ENST00000262290 2979 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
IDH3BO43837 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
IDH3BO43837 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
IDH3BO43837 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
IDH3BO43837 LARP4-201ENST00000293618 6296 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
IDH3BO43837 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC13.87□□□□□ -0.19
IDH3BO43837 MEST-204ENST00000393187 2380 ntAPPRIS ALT1 TSL 5 BASIC13.87□□□□□ -0.19
IDH3BO43837 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC13.87□□□□□ -0.19
IDH3BO43837 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
IDH3BO43837 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
IDH3BO43837 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
IDH3BO43837 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC13.87□□□□□ -0.19
IDH3BO43837 MANBA-202ENST00000505239 2577 ntTSL 2 BASIC13.86□□□□□ -0.19
IDH3BO43837 CCR7-201ENST00000246657 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
IDH3BO43837 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
IDH3BO43837 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
IDH3BO43837 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC13.86□□□□□ -0.19
IDH3BO43837 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
IDH3BO43837 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
IDH3BO43837 FBN3-207ENST00000601739 9086 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
IDH3BO43837 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
IDH3BO43837 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC13.86□□□□□ -0.19
IDH3BO43837 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC13.86□□□□□ -0.19
IDH3BO43837 PELP1-202ENST00000436683 3524 ntTSL 2 BASIC13.86□□□□□ -0.19
IDH3BO43837 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
IDH3BO43837 RIPOR3-202ENST00000327979 4377 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
IDH3BO43837 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
IDH3BO43837 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
IDH3BO43837 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC13.86□□□□□ -0.19
IDH3BO43837 KRT18P64-201ENST00000434946 1219 ntBASIC13.86□□□□□ -0.19
IDH3BO43837 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC13.86□□□□□ -0.19
IDH3BO43837 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC13.86□□□□□ -0.19
IDH3BO43837 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC13.86□□□□□ -0.19
IDH3BO43837 AC010327.4-202ENST00000591484 748 ntBASIC13.86□□□□□ -0.19
IDH3BO43837 CD22-209ENST00000594250 2107 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
IDH3BO43837 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC13.86□□□□□ -0.19
IDH3BO43837 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC13.86□□□□□ -0.19
IDH3BO43837 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC13.86□□□□□ -0.19
IDH3BO43837 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC13.86□□□□□ -0.19
IDH3BO43837 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
IDH3BO43837 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
IDH3BO43837 TMUB2-201ENST00000319511 2418 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
IDH3BO43837 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
IDH3BO43837 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
IDH3BO43837 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
IDH3BO43837 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
IDH3BO43837 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
IDH3BO43837 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
IDH3BO43837 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC13.86□□□□□ -0.19
IDH3BO43837 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC13.86□□□□□ -0.19
IDH3BO43837 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
IDH3BO43837 ZNF772-204ENST00000427512 5130 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
IDH3BO43837 INTS4P1-203ENST00000641008 3683 ntBASIC13.86□□□□□ -0.19
IDH3BO43837 MYH14-201ENST00000262269 3848 ntTSL 5 BASIC13.86□□□□□ -0.19
IDH3BO43837 EHMT2-204ENST00000395728 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
IDH3BO43837 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
IDH3BO43837 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
IDH3BO43837 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
IDH3BO43837 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
IDH3BO43837 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
IDH3BO43837 TMCC2-201ENST00000329800 2818 ntTSL 2 BASIC13.86□□□□□ -0.19
IDH3BO43837 PDE1C-205ENST00000396191 2952 ntAPPRIS ALT1 TSL 2 BASIC13.86□□□□□ -0.19
IDH3BO43837 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
IDH3BO43837 BORCS5-202ENST00000314565 4840 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
IDH3BO43837 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
IDH3BO43837 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
IDH3BO43837 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC13.85□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms