Protein–RNA interactions for Protein: O15516

CLOCK, Circadian locomoter output cycles protein kaput, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCKO15516 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CLOCKO15516 LINC01271-201ENST00000441214 2250 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CLOCKO15516 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC14.33□□□□□ -0.12
CLOCKO15516 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
CLOCKO15516 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC14.33□□□□□ -0.12
CLOCKO15516 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CLOCKO15516 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CLOCKO15516 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CLOCKO15516 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC14.33□□□□□ -0.12
CLOCKO15516 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC14.33□□□□□ -0.12
CLOCKO15516 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
CLOCKO15516 TREML5P-201ENST00000421694 576 ntBASIC14.33□□□□□ -0.12
CLOCKO15516 HNRNPA1P40-201ENST00000426371 1278 ntBASIC14.33□□□□□ -0.12
CLOCKO15516 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC14.33□□□□□ -0.12
CLOCKO15516 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC14.33□□□□□ -0.12
CLOCKO15516 TPT1P11-201ENST00000458482 498 ntBASIC14.33□□□□□ -0.12
CLOCKO15516 LHX6-205ENST00000464484 666 ntTSL 2 BASIC14.33□□□□□ -0.12
CLOCKO15516 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CLOCKO15516 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC14.33□□□□□ -0.12
CLOCKO15516 RARRES2P9-201ENST00000565168 469 ntBASIC14.33□□□□□ -0.12
CLOCKO15516 MIR4745-201ENST00000577608 62 ntBASIC14.33□□□□□ -0.12
CLOCKO15516 INO80C-206ENST00000586489 594 ntTSL 3 BASIC14.33□□□□□ -0.12
CLOCKO15516 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC14.33□□□□□ -0.12
CLOCKO15516 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
CLOCKO15516 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC14.33□□□□□ -0.12
CLOCKO15516 AL390955.2-201ENST00000603032 514 ntBASIC14.33□□□□□ -0.12
CLOCKO15516 AL390754.1-201ENST00000619088 582 ntBASIC14.33□□□□□ -0.12
CLOCKO15516 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
CLOCKO15516 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CLOCKO15516 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CLOCKO15516 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
CLOCKO15516 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CLOCKO15516 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC14.33□□□□□ -0.12
CLOCKO15516 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
CLOCKO15516 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
CLOCKO15516 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CLOCKO15516 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
CLOCKO15516 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
CLOCKO15516 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CLOCKO15516 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC14.33□□□□□ -0.12
CLOCKO15516 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
CLOCKO15516 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CLOCKO15516 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
CLOCKO15516 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
CLOCKO15516 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CLOCKO15516 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC14.33□□□□□ -0.12
CLOCKO15516 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CLOCKO15516 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
CLOCKO15516 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CLOCKO15516 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC14.33□□□□□ -0.12
CLOCKO15516 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
CLOCKO15516 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CLOCKO15516 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC14.32□□□□□ -0.12
CLOCKO15516 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CLOCKO15516 SNPH-201ENST00000381867 5533 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CLOCKO15516 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CLOCKO15516 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC14.32□□□□□ -0.12
CLOCKO15516 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CLOCKO15516 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CLOCKO15516 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC14.32□□□□□ -0.12
CLOCKO15516 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CLOCKO15516 LSS-211ENST00000522411 2523 ntTSL 2 BASIC14.32□□□□□ -0.12
CLOCKO15516 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CLOCKO15516 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CLOCKO15516 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CLOCKO15516 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CLOCKO15516 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
CLOCKO15516 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CLOCKO15516 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CLOCKO15516 AC055876.3-201ENST00000431496 288 ntBASIC14.32□□□□□ -0.12
CLOCKO15516 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC14.32□□□□□ -0.12
CLOCKO15516 GATD1-206ENST00000526325 756 ntTSL 5 BASIC14.32□□□□□ -0.12
CLOCKO15516 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
CLOCKO15516 GREM1-201ENST00000560677 623 ntTSL 4 BASIC14.32□□□□□ -0.12
CLOCKO15516 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC14.32□□□□□ -0.12
CLOCKO15516 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC14.32□□□□□ -0.12
CLOCKO15516 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC14.32□□□□□ -0.12
CLOCKO15516 AC138649.4-201ENST00000612222 287 ntBASIC14.32□□□□□ -0.12
CLOCKO15516 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CLOCKO15516 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
CLOCKO15516 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
CLOCKO15516 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CLOCKO15516 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
CLOCKO15516 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
CLOCKO15516 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
CLOCKO15516 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
CLOCKO15516 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CLOCKO15516 PPT1-213ENST00000641319 2388 ntBASIC14.32□□□□□ -0.12
CLOCKO15516 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CLOCKO15516 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC14.32□□□□□ -0.12
CLOCKO15516 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
CLOCKO15516 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC14.32□□□□□ -0.12
CLOCKO15516 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
CLOCKO15516 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CLOCKO15516 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
CLOCKO15516 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC14.32□□□□□ -0.12
CLOCKO15516 DMBT1P1-203ENST00000636837 4628 ntBASIC14.32□□□□□ -0.12
CLOCKO15516 AC005562.1-201ENST00000583030 3219 ntBASIC14.32□□□□□ -0.12
CLOCKO15516 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
CLOCKO15516 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms