Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 UROS-201ENST00000368774 744 ntTSL 2 BASIC17.81■□□□□ 0.44
FOXN1O15353 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
FOXN1O15353 SUN1-204ENST00000403868 978 ntTSL 2 BASIC17.81■□□□□ 0.44
FOXN1O15353 PSMD4P1-201ENST00000433951 1109 ntBASIC17.81■□□□□ 0.44
FOXN1O15353 AC069208.1-205ENST00000456299 576 ntTSL 4 BASIC17.81■□□□□ 0.44
FOXN1O15353 PHKG1P2-201ENST00000457537 863 ntBASIC17.81■□□□□ 0.44
FOXN1O15353 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC17.81■□□□□ 0.44
FOXN1O15353 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC17.81■□□□□ 0.44
FOXN1O15353 AC011247.3-201ENST00000603297 438 ntBASIC17.81■□□□□ 0.44
FOXN1O15353 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC17.81■□□□□ 0.44
FOXN1O15353 LINC00431-202ENST00000636375 159 ntBASIC17.81■□□□□ 0.44
FOXN1O15353 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC17.81■□□□□ 0.44
FOXN1O15353 ZEB1-AS1-208ENST00000607166 2503 ntBASIC17.81■□□□□ 0.44
FOXN1O15353 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
FOXN1O15353 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
FOXN1O15353 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC17.81■□□□□ 0.44
FOXN1O15353 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
FOXN1O15353 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC17.81■□□□□ 0.44
FOXN1O15353 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC17.81■□□□□ 0.44
FOXN1O15353 GSN-215ENST00000545652 2428 ntTSL 2 BASIC17.81■□□□□ 0.44
FOXN1O15353 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
FOXN1O15353 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
FOXN1O15353 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
FOXN1O15353 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
FOXN1O15353 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
FOXN1O15353 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
FOXN1O15353 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.81■□□□□ 0.44
FOXN1O15353 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
FOXN1O15353 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
FOXN1O15353 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
FOXN1O15353 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC17.81■□□□□ 0.44
FOXN1O15353 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC17.81■□□□□ 0.44
FOXN1O15353 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
FOXN1O15353 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
FOXN1O15353 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
FOXN1O15353 AC006058.4-201ENST00000624016 1670 ntBASIC17.8■□□□□ 0.44
FOXN1O15353 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
FOXN1O15353 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
FOXN1O15353 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
FOXN1O15353 ANKRD30BP2-201ENST00000435744 1610 ntBASIC17.8■□□□□ 0.44
FOXN1O15353 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC17.8■□□□□ 0.44
FOXN1O15353 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
FOXN1O15353 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
FOXN1O15353 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
FOXN1O15353 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
FOXN1O15353 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
FOXN1O15353 RN7SKP214-201ENST00000364208 315 ntBASIC17.8■□□□□ 0.44
FOXN1O15353 PBDC1-201ENST00000373357 977 ntTSL 2 BASIC17.8■□□□□ 0.44
FOXN1O15353 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
FOXN1O15353 CRYBB3-202ENST00000404334 601 ntTSL 3 BASIC17.8■□□□□ 0.44
FOXN1O15353 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC17.8■□□□□ 0.44
FOXN1O15353 AC004869.1-201ENST00000440935 540 ntTSL 4 BASIC17.8■□□□□ 0.44
FOXN1O15353 TREX1-202ENST00000444177 1200 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
FOXN1O15353 AC024293.1-201ENST00000467930 498 ntBASIC17.8■□□□□ 0.44
FOXN1O15353 GAPDHP40-201ENST00000505218 1006 ntBASIC17.8■□□□□ 0.44
FOXN1O15353 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC17.8■□□□□ 0.44
FOXN1O15353 NAT9-211ENST00000580632 799 ntTSL 3 BASIC17.8■□□□□ 0.44
FOXN1O15353 AC006158.1-201ENST00000610661 249 ntBASIC17.8■□□□□ 0.44
FOXN1O15353 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
FOXN1O15353 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
FOXN1O15353 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
FOXN1O15353 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
FOXN1O15353 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
FOXN1O15353 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
FOXN1O15353 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
FOXN1O15353 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
FOXN1O15353 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
FOXN1O15353 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
FOXN1O15353 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
FOXN1O15353 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC17.8■□□□□ 0.44
FOXN1O15353 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
FOXN1O15353 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
FOXN1O15353 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
FOXN1O15353 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
FOXN1O15353 PCNA-202ENST00000379160 1359 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
FOXN1O15353 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
FOXN1O15353 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
FOXN1O15353 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
FOXN1O15353 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
FOXN1O15353 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
FOXN1O15353 TCAF2P1-201ENST00000291129 2421 ntBASIC17.79■□□□□ 0.44
FOXN1O15353 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
FOXN1O15353 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
FOXN1O15353 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
FOXN1O15353 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
FOXN1O15353 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC17.79■□□□□ 0.44
FOXN1O15353 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
FOXN1O15353 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
FOXN1O15353 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
FOXN1O15353 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
FOXN1O15353 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC17.79■□□□□ 0.44
FOXN1O15353 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC17.79■□□□□ 0.44
FOXN1O15353 AL365295.1-203ENST00000435322 566 ntTSL 4 BASIC17.79■□□□□ 0.44
FOXN1O15353 PUDPP3-201ENST00000445368 636 ntBASIC17.79■□□□□ 0.44
FOXN1O15353 CHMP1AP1-201ENST00000445563 662 ntBASIC17.79■□□□□ 0.44
FOXN1O15353 TMEM222-204ENST00000466759 368 ntTSL 3 BASIC17.79■□□□□ 0.44
FOXN1O15353 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
FOXN1O15353 MIR5196-201ENST00000578146 115 ntBASIC17.79■□□□□ 0.44
FOXN1O15353 AC103808.3-201ENST00000579714 598 ntTSL 5 BASIC17.79■□□□□ 0.44
FOXN1O15353 OR10B1P-201ENST00000601666 907 ntBASIC17.79■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 89 ms