Protein–RNA interactions for Protein: H3BVE0

BOLA2-SMG1P6, BOLA2-SMG1P6 readthrough (Fragment), humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BOLA2-SMG1P6H3BVE0 ZNF568-206ENST00000455427 2378 ntTSL 2 BASIC13.08□□□□□ -0.32
BOLA2-SMG1P6H3BVE0 DDX54-201ENST00000306014 4377 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
BOLA2-SMG1P6H3BVE0 PLA2G15-201ENST00000219345 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
BOLA2-SMG1P6H3BVE0 COL4A1-201ENST00000375820 6532 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
BOLA2-SMG1P6H3BVE0 FERMT2-202ENST00000343279 3247 ntTSL 5 BASIC13.08□□□□□ -0.32
BOLA2-SMG1P6H3BVE0 RIC8A-203ENST00000526104 3703 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
BOLA2-SMG1P6H3BVE0 AC006504.4-201ENST00000592118 1568 ntBASIC13.08□□□□□ -0.32
BOLA2-SMG1P6H3BVE0 SLC4A5-201ENST00000346834 6233 ntAPPRIS P4 TSL 5 BASIC13.08□□□□□ -0.32
BOLA2-SMG1P6H3BVE0 LINC00442-202ENST00000456737 2063 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
BOLA2-SMG1P6H3BVE0 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC13.08□□□□□ -0.32
BOLA2-SMG1P6H3BVE0 CDK2-201ENST00000266970 2296 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
BOLA2-SMG1P6H3BVE0 ITIH5-201ENST00000397145 3132 ntTSL 2 BASIC13.08□□□□□ -0.32
BOLA2-SMG1P6H3BVE0 SLC7A8-205ENST00000453702 1752 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
BOLA2-SMG1P6H3BVE0 HNRNPMP1-201ENST00000560685 1768 ntBASIC13.08□□□□□ -0.32
BOLA2-SMG1P6H3BVE0 WDR92-201ENST00000295121 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
BOLA2-SMG1P6H3BVE0 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
BOLA2-SMG1P6H3BVE0 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC13.08□□□□□ -0.32
BOLA2-SMG1P6H3BVE0 TSPY22P-201ENST00000427496 604 ntBASIC13.08□□□□□ -0.32
BOLA2-SMG1P6H3BVE0 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC13.08□□□□□ -0.32
BOLA2-SMG1P6H3BVE0 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC13.08□□□□□ -0.32
BOLA2-SMG1P6H3BVE0 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
BOLA2-SMG1P6H3BVE0 TLN2-202ENST00000472902 2116 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
BOLA2-SMG1P6H3BVE0 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC13.08□□□□□ -0.32
BOLA2-SMG1P6H3BVE0 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC13.08□□□□□ -0.32
BOLA2-SMG1P6H3BVE0 AL049597.2-201ENST00000565575 961 ntBASIC13.08□□□□□ -0.32
BOLA2-SMG1P6H3BVE0 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC13.08□□□□□ -0.32
BOLA2-SMG1P6H3BVE0 MEGF11-201ENST00000288745 5707 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
BOLA2-SMG1P6H3BVE0 CICP18-201ENST00000406017 2812 ntBASIC13.08□□□□□ -0.32
BOLA2-SMG1P6H3BVE0 SYTL4-201ENST00000263033 2335 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
BOLA2-SMG1P6H3BVE0 CCBE1-201ENST00000398179 5979 ntTSL 5 BASIC13.08□□□□□ -0.32
BOLA2-SMG1P6H3BVE0 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
BOLA2-SMG1P6H3BVE0 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
BOLA2-SMG1P6H3BVE0 PIGS-202ENST00000308360 2877 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
BOLA2-SMG1P6H3BVE0 JAM3-201ENST00000299106 3912 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
BOLA2-SMG1P6H3BVE0 GALNT16-201ENST00000337827 5708 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
BOLA2-SMG1P6H3BVE0 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
BOLA2-SMG1P6H3BVE0 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC13.08□□□□□ -0.32
BOLA2-SMG1P6H3BVE0 PML-210ENST00000563500 4502 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
BOLA2-SMG1P6H3BVE0 SYDE1-203ENST00000600252 3832 ntTSL 2 BASIC13.08□□□□□ -0.32
BOLA2-SMG1P6H3BVE0 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
BOLA2-SMG1P6H3BVE0 TMPRSS4-213ENST00000522824 2052 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
BOLA2-SMG1P6H3BVE0 USP51-201ENST00000500968 4407 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
BOLA2-SMG1P6H3BVE0 EPHA1-201ENST00000275815 3363 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
BOLA2-SMG1P6H3BVE0 XRCC3-202ENST00000553264 3018 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
BOLA2-SMG1P6H3BVE0 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
BOLA2-SMG1P6H3BVE0 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC13.07□□□□□ -0.32
BOLA2-SMG1P6H3BVE0 PLIN3-201ENST00000221957 2333 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
BOLA2-SMG1P6H3BVE0 CELF3-202ENST00000290585 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
BOLA2-SMG1P6H3BVE0 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC13.07□□□□□ -0.32
BOLA2-SMG1P6H3BVE0 DISC1-206ENST00000366637 6848 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
BOLA2-SMG1P6H3BVE0 KIF9-207ENST00000444589 2791 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
BOLA2-SMG1P6H3BVE0 GRM4-209ENST00000609222 3176 ntTSL 2 BASIC13.07□□□□□ -0.32
BOLA2-SMG1P6H3BVE0 NUP62-208ENST00000596217 3590 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
BOLA2-SMG1P6H3BVE0 ESYT1-202ENST00000394048 4388 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
BOLA2-SMG1P6H3BVE0 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC13.07□□□□□ -0.32
BOLA2-SMG1P6H3BVE0 PLIN4-201ENST00000301286 6353 ntAPPRIS P2 TSL 5 BASIC13.07□□□□□ -0.32
BOLA2-SMG1P6H3BVE0 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
BOLA2-SMG1P6H3BVE0 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
BOLA2-SMG1P6H3BVE0 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC13.07□□□□□ -0.32
BOLA2-SMG1P6H3BVE0 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC13.07□□□□□ -0.32
BOLA2-SMG1P6H3BVE0 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC13.07□□□□□ -0.32
BOLA2-SMG1P6H3BVE0 PMS2P1-201ENST00000431037 1228 ntBASIC13.07□□□□□ -0.32
BOLA2-SMG1P6H3BVE0 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
BOLA2-SMG1P6H3BVE0 AL136038.3-201ENST00000561909 1096 ntBASIC13.07□□□□□ -0.32
BOLA2-SMG1P6H3BVE0 AL592071.1-201ENST00000611956 408 ntBASIC13.07□□□□□ -0.32
BOLA2-SMG1P6H3BVE0 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC13.07□□□□□ -0.32
BOLA2-SMG1P6H3BVE0 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC13.07□□□□□ -0.32
BOLA2-SMG1P6H3BVE0 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
BOLA2-SMG1P6H3BVE0 DYNC1I1-204ENST00000437599 2895 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
BOLA2-SMG1P6H3BVE0 ANP32E-210ENST00000629042 3054 ntTSL 5 BASIC13.07□□□□□ -0.32
BOLA2-SMG1P6H3BVE0 ILF3-202ENST00000407004 3671 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
BOLA2-SMG1P6H3BVE0 TRAK1-210ENST00000613405 4672 ntTSL 2 BASIC13.07□□□□□ -0.32
BOLA2-SMG1P6H3BVE0 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
BOLA2-SMG1P6H3BVE0 ZNF197-204ENST00000383745 2935 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
BOLA2-SMG1P6H3BVE0 GRIP2-204ENST00000619221 7977 ntAPPRIS P5 TSL 5 BASIC13.07□□□□□ -0.32
BOLA2-SMG1P6H3BVE0 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
BOLA2-SMG1P6H3BVE0 FAM212B-201ENST00000357260 5980 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
BOLA2-SMG1P6H3BVE0 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
BOLA2-SMG1P6H3BVE0 CPLX2-201ENST00000359546 5023 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
BOLA2-SMG1P6H3BVE0 EDEM3-202ENST00000367512 6678 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
BOLA2-SMG1P6H3BVE0 TMPRSS13-205ENST00000526090 2592 ntTSL 2 BASIC13.07□□□□□ -0.32
BOLA2-SMG1P6H3BVE0 PHC2-201ENST00000257118 3870 ntAPPRIS P4 TSL 1 (best) BASIC13.07□□□□□ -0.32
BOLA2-SMG1P6H3BVE0 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
BOLA2-SMG1P6H3BVE0 SLITRK3-201ENST00000241274 4391 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
BOLA2-SMG1P6H3BVE0 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
BOLA2-SMG1P6H3BVE0 GRAMD1B-215ENST00000638086 2665 ntTSL 5 BASIC13.06□□□□□ -0.32
BOLA2-SMG1P6H3BVE0 RGPD5-203ENST00000393283 3304 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
BOLA2-SMG1P6H3BVE0 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
BOLA2-SMG1P6H3BVE0 ATG4C-201ENST00000317868 2938 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
BOLA2-SMG1P6H3BVE0 AC019205.2-203ENST00000421315 3362 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
BOLA2-SMG1P6H3BVE0 AC115284.2-201ENST00000624646 2054 ntBASIC13.06□□□□□ -0.32
BOLA2-SMG1P6H3BVE0 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
BOLA2-SMG1P6H3BVE0 LIMCH1-213ENST00000511496 3439 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
BOLA2-SMG1P6H3BVE0 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
BOLA2-SMG1P6H3BVE0 ACTN1-202ENST00000376839 2824 ntTSL 2 BASIC13.06□□□□□ -0.32
BOLA2-SMG1P6H3BVE0 SRRM2-AS1-201ENST00000382313 3523 ntTSL 2 BASIC13.06□□□□□ -0.32
BOLA2-SMG1P6H3BVE0 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC13.06□□□□□ -0.32
BOLA2-SMG1P6H3BVE0 NDRG4-201ENST00000258187 3324 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
BOLA2-SMG1P6H3BVE0 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC13.06□□□□□ -0.32
BOLA2-SMG1P6H3BVE0 MIER1-202ENST00000355977 3595 ntTSL 5 BASIC13.06□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms