Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC13.68□□□□□ -0.22
NPIPA2E9PIF3 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
NPIPA2E9PIF3 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NPIPA2E9PIF3 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NPIPA2E9PIF3 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
NPIPA2E9PIF3 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NPIPA2E9PIF3 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
NPIPA2E9PIF3 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
NPIPA2E9PIF3 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NPIPA2E9PIF3 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NPIPA2E9PIF3 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.22
NPIPA2E9PIF3 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NPIPA2E9PIF3 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
NPIPA2E9PIF3 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NPIPA2E9PIF3 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NPIPA2E9PIF3 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
NPIPA2E9PIF3 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
NPIPA2E9PIF3 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
NPIPA2E9PIF3 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NPIPA2E9PIF3 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
NPIPA2E9PIF3 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
NPIPA2E9PIF3 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
NPIPA2E9PIF3 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
NPIPA2E9PIF3 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NPIPA2E9PIF3 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC13.67□□□□□ -0.22
NPIPA2E9PIF3 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NPIPA2E9PIF3 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
NPIPA2E9PIF3 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
NPIPA2E9PIF3 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NPIPA2E9PIF3 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
NPIPA2E9PIF3 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
NPIPA2E9PIF3 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
NPIPA2E9PIF3 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
NPIPA2E9PIF3 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC13.67□□□□□ -0.22
NPIPA2E9PIF3 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NPIPA2E9PIF3 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
NPIPA2E9PIF3 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NPIPA2E9PIF3 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NPIPA2E9PIF3 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NPIPA2E9PIF3 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NPIPA2E9PIF3 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
NPIPA2E9PIF3 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NPIPA2E9PIF3 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NPIPA2E9PIF3 MECR-202ENST00000373791 2416 ntTSL 2 BASIC13.67□□□□□ -0.22
NPIPA2E9PIF3 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NPIPA2E9PIF3 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC13.67□□□□□ -0.22
NPIPA2E9PIF3 RPS3-201ENST00000278572 907 ntTSL 3 BASIC13.67□□□□□ -0.22
NPIPA2E9PIF3 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NPIPA2E9PIF3 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NPIPA2E9PIF3 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC13.67□□□□□ -0.22
NPIPA2E9PIF3 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NPIPA2E9PIF3 MIR1247-201ENST00000408206 136 ntBASIC13.67□□□□□ -0.22
NPIPA2E9PIF3 LSM5-207ENST00000410044 687 ntTSL 3 BASIC13.67□□□□□ -0.22
NPIPA2E9PIF3 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
NPIPA2E9PIF3 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
NPIPA2E9PIF3 EIF3FP3-201ENST00000434851 1086 ntBASIC13.67□□□□□ -0.22
NPIPA2E9PIF3 AC006033.1-201ENST00000440505 426 ntBASIC13.67□□□□□ -0.22
NPIPA2E9PIF3 AC245100.3-201ENST00000441281 285 ntBASIC13.67□□□□□ -0.22
NPIPA2E9PIF3 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC13.67□□□□□ -0.22
NPIPA2E9PIF3 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC13.67□□□□□ -0.22
NPIPA2E9PIF3 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC13.67□□□□□ -0.22
NPIPA2E9PIF3 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC13.67□□□□□ -0.22
NPIPA2E9PIF3 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC13.67□□□□□ -0.22
NPIPA2E9PIF3 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC13.67□□□□□ -0.22
NPIPA2E9PIF3 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC13.67□□□□□ -0.22
NPIPA2E9PIF3 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC13.67□□□□□ -0.22
NPIPA2E9PIF3 EEF1DP1-201ENST00000585891 896 ntBASIC13.67□□□□□ -0.22
NPIPA2E9PIF3 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC13.67□□□□□ -0.22
NPIPA2E9PIF3 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
NPIPA2E9PIF3 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
NPIPA2E9PIF3 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC13.67□□□□□ -0.22
NPIPA2E9PIF3 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NPIPA2E9PIF3 AC015818.8-201ENST00000587907 1519 ntBASIC13.67□□□□□ -0.22
NPIPA2E9PIF3 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC13.67□□□□□ -0.22
NPIPA2E9PIF3 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NPIPA2E9PIF3 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NPIPA2E9PIF3 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NPIPA2E9PIF3 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC13.67□□□□□ -0.22
NPIPA2E9PIF3 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
NPIPA2E9PIF3 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC13.67□□□□□ -0.22
NPIPA2E9PIF3 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC13.67□□□□□ -0.22
NPIPA2E9PIF3 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
NPIPA2E9PIF3 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NPIPA2E9PIF3 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NPIPA2E9PIF3 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NPIPA2E9PIF3 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC13.67□□□□□ -0.22
NPIPA2E9PIF3 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
NPIPA2E9PIF3 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC13.67□□□□□ -0.22
NPIPA2E9PIF3 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NPIPA2E9PIF3 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
NPIPA2E9PIF3 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NPIPA2E9PIF3 REXO1L5P-201ENST00000622260 2098 ntBASIC13.67□□□□□ -0.22
NPIPA2E9PIF3 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
NPIPA2E9PIF3 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
NPIPA2E9PIF3 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NPIPA2E9PIF3 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NPIPA2E9PIF3 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC13.67□□□□□ -0.22
NPIPA2E9PIF3 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
NPIPA2E9PIF3 TCAF2P1-201ENST00000291129 2421 ntBASIC13.66□□□□□ -0.22
NPIPA2E9PIF3 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms